RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 MED10Q9BTT4 135 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 MCOLN1Q9GZU1 580 aa20.14■□□□□ 0.81
SNX17-203ENST00000440760 COL4A6Q14031 1691 aa20.13■□□□□ 0.81
SNX17-203ENST00000440760 ALPK3Q96L96 1907 aa20.13■□□□□ 0.81
SNX17-203ENST00000440760 BEST1O76090 585 aa20.13■□□□□ 0.81
SNX17-203ENST00000440760 CYP11A1P05108 521 aa20.13■□□□□ 0.81
SNX17-203ENST00000440760 OR6B2Q6IFH4 312 aa20.13■□□□□ 0.81
SNX17-203ENST00000440760 OR10T2Q8NGX3 314 aa20.13■□□□□ 0.81
SNX17-203ENST00000440760 MCRS1Q96EZ8 462 aa20.13■□□□□ 0.81
SNX17-203ENST00000440760 PCED1BQ96HM7 432 aa20.13■□□□□ 0.81
SNX17-203ENST00000440760 B3GNT5Q9BYG0 378 aa20.13■□□□□ 0.81
SNX17-203ENST00000440760 RHOBTB2Q9BYZ6 727 aa20.13■□□□□ 0.81
SNX17-203ENST00000440760 KRT82Q9NSB4 513 aa20.13■□□□□ 0.81
SNX17-203ENST00000440760 GRAP2O75791 330 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 FAM163BP0C2L3 166 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 SETSIPP0DME0 302 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 KRT3P12035 628 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 TCF4P15884 667 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 CTNNA1P35221 906 aaKnown RBP20.12■□□□□ 0.81
SNX17-203ENST00000440760 GJC1P36383 396 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 GSCP56915 257 aaPredicted RBP20.12■□□□□ 0.81
SNX17-203ENST00000440760 IKBKEQ14164 716 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 OVOS1Q6IE37 1185 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 METTL23Q86XA0 190 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 CLEC4CQ8WTT0 213 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 UBXN4Q92575 508 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 PBKQ96KB5 322 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 HNRNPABQ99729 332 aaKnown RBP20.12■□□□□ 0.81
SNX17-203ENST00000440760 SLC4A5Q9BY07 1137 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 DNAI2Q9GZS0 605 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 MIF4GDA9UHW6 222 aaKnown RBP20.12■□□□□ 0.81
SNX17-203ENST00000440760 NT5C1B-RDH14C9J2C7 533 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 NRP1O14786 923 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 TIMP1P01033 207 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 EN2P19622 333 aaPredicted RBP20.12■□□□□ 0.81
SNX17-203ENST00000440760 SLC11A1P49279 550 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 TAS2R40P59535 323 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 ZNF268Q14587 947 aaPredicted RBP20.12■□□□□ 0.81
SNX17-203ENST00000440760 CFAP221Q4G0U5 840 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 FAM35AQ86V20 835 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 UBL4BQ8N7F7 174 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 MIS12Q9H081 205 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 WDR35Q9P2L0 1181 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 CDH9Q9ULB4 789 aa20.12■□□□□ 0.81
SNX17-203ENST00000440760 NLRC5Q86WI3 1866 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 SIGLEC16A6NMB1 481 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 F8VP50 259 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 TMEM189-UBE2V1I3L0A0 370 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 RAG1P15918 1043 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 PCSK1P29120 753 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 PAFAH1B1P43034 410 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 PEX5P50542 639 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 CACNA2D1P54289 1103 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 TAF5Q15542 800 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 SCUBE3Q8IX30 993 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 MYLPFQ96A32 169 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 B3GALT6Q96L58 329 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 TMEM30AQ9NV96 361 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 MARCH5Q9NX47 278 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 IP6K2Q9UHH9 426 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 PCDHB8Q9UN66 801 aa20.11■□□□□ 0.81
SNX17-203ENST00000440760 CES2O00748 559 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 PAPSS1O43252 624 aaPredicted RBP20.1■□□□□ 0.81
SNX17-203ENST00000440760 HOXA2O43364 376 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 RRP9O43818 475 aaKnown RBP20.1■□□□□ 0.81
SNX17-203ENST00000440760 ACRP10323 421 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 LCP1P13796 627 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 NPR3P17342 541 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 CTNNA2P26232 953 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 SSR1P43307 286 aaKnown RBP20.1■□□□□ 0.81
SNX17-203ENST00000440760 TRNP1Q6NT89 227 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 FAM117BQ6P1L5 589 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 OLFML1Q6UWY5 402 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 CLEC20AQ6ZU45 233 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 ZNF572Q7Z3I7 529 aaPredicted RBP20.1■□□□□ 0.81
SNX17-203ENST00000440760 TMEM173Q86WV6 379 aaPredicted RBP20.1■□□□□ 0.81
SNX17-203ENST00000440760 SPATA4Q8NEY3 305 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 RNPC3Q96LT9 517 aaKnown RBP20.1■□□□□ 0.81
SNX17-203ENST00000440760 RBM12Q9NTZ6 932 aaKnown RBP20.1■□□□□ 0.81
SNX17-203ENST00000440760 TMLHEQ9NVH6 421 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 DSEQ9UL01 958 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 PTPRDP23468 1912 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 KIAA0355O15063 1070 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 TADA2AO75478 443 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 RFC2P35250 354 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 MAP3K7CLP57077 242 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 DEFB103AP81534 67 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 TAP1Q03518 808 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 YWHAHQ04917 246 aaPredicted RBP20.1■□□□□ 0.81
SNX17-203ENST00000440760 INTS6LQ5JSJ4 861 aaKnown RBP20.1■□□□□ 0.81
SNX17-203ENST00000440760 TMEM110Q86TL2 294 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 PIGZQ86VD9 579 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.1■□□□□ 0.81
SNX17-203ENST00000440760 MYCBPAPQ8TBZ2 947 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 DUSP16Q9BY84 665 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 CARD9Q9H257 536 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 PCDHA3Q9Y5H8 950 aa20.1■□□□□ 0.81
SNX17-203ENST00000440760 CCDC66A2RUB6 948 aa20.09■□□□□ 0.81
SNX17-203ENST00000440760 PGRMC1O00264 195 aaKnown RBP20.09■□□□□ 0.81
SNX17-203ENST00000440760 DYNC1I1O14576 645 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms