RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 FAM161BQ96MY7 647 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 PANX2Q96RD6 677 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 DUSP16Q9BY84 665 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 UBXN6Q9BZV1 441 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 ZNF518BQ9C0D4 1074 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 LHX5Q9H2C1 402 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 KRT82Q9NSB4 513 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 ZDHHC7Q9NXF8 308 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 MYH10P35580 1976 aa19.49■□□□□ 0.71
HDAC6-208ENST00000438518 MICAL2O94851 1124 aa19.48■□□□□ 0.71
HDAC6-208ENST00000438518 LSM8O95777 96 aaKnown RBP19.48■□□□□ 0.71
HDAC6-208ENST00000438518 IGFBP4P22692 258 aa19.48■□□□□ 0.71
HDAC6-208ENST00000438518 BDNFP23560 247 aa19.48■□□□□ 0.71
HDAC6-208ENST00000438518 ADORA2BP29275 332 aa19.48■□□□□ 0.71
HDAC6-208ENST00000438518 ALDH1A3P47895 512 aa19.48■□□□□ 0.71
HDAC6-208ENST00000438518 CDK17Q00537 523 aa19.48■□□□□ 0.71
HDAC6-208ENST00000438518 ARID5AQ03989 594 aa19.48■□□□□ 0.71
HDAC6-208ENST00000438518 DUSP4Q13115 394 aa19.48■□□□□ 0.71
HDAC6-208ENST00000438518 GOLGA7BQ2TAP0 167 aa19.48■□□□□ 0.71
HDAC6-208ENST00000438518 MGAT5BQ3V5L5 792 aa19.48■□□□□ 0.71
HDAC6-208ENST00000438518 RBM23Q86U06 439 aaKnown RBP19.48■□□□□ 0.71
HDAC6-208ENST00000438518 NOP9Q86U38 636 aaKnown RBP19.48■□□□□ 0.71
HDAC6-208ENST00000438518 SPATA17Q96L03 361 aa19.48■□□□□ 0.71
HDAC6-208ENST00000438518 NOX5Q96PH1 765 aa19.48■□□□□ 0.71
HDAC6-208ENST00000438518 PDCL3Q9H2J4 239 aa19.48■□□□□ 0.71
HDAC6-208ENST00000438518 MAN1C1Q9NR34 630 aa19.48■□□□□ 0.71
HDAC6-208ENST00000438518 EHD2Q9NZN4 543 aa19.48■□□□□ 0.71
HDAC6-208ENST00000438518 INSL5Q9Y5Q6 135 aa19.48■□□□□ 0.71
HDAC6-208ENST00000438518 M0QYV0 167 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 XPO1O14980 1071 aaKnown RBP19.47■□□□□ 0.71
HDAC6-208ENST00000438518 PER2O15055 1255 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 AP1G2O75843 785 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 PAPLNO95428 1278 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 VNN2O95498 520 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 C8AP07357 584 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 HNRNPA1P09651 372 aaKnown RBP eCLIP19.47■□□□□ 0.71
HDAC6-208ENST00000438518 CYP2F1P24903 491 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 GRIK1P39086 918 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 ADKP55263 362 aaKnown RBP19.47■□□□□ 0.71
HDAC6-208ENST00000438518 HYAL1Q12794 435 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 CCDC142Q17RM4 750 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 PKDCCQ504Y2 493 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 TDRD12Q587J7 1177 aaKnown RBP19.47■□□□□ 0.71
HDAC6-208ENST00000438518 CYP26C1Q6V0L0 522 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 CLEC20AQ6ZU45 233 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 STK32AQ8WU08 396 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 CDX2Q99626 313 aaPredicted RBP19.47■□□□□ 0.71
HDAC6-208ENST00000438518 SEPT5Q99719 369 aaPredicted RBP19.47■□□□□ 0.71
HDAC6-208ENST00000438518 AGPAT1Q99943 283 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 ZSWIM1Q9BR11 485 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 HAUS4Q9H6D7 363 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 ACP6Q9NPH0 428 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 CYLDQ9NQC7 956 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 YIPF1Q9Y548 306 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 ASB3Q9Y575 518 aa19.47■□□□□ 0.71
HDAC6-208ENST00000438518 SSU72P8A0A1W2PR75 194 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 CLDN5O00501 218 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 ZMYND10O75800 440 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 LRG1P02750 347 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 EPCAMP16422 314 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 HOXB8P17481 243 aaPredicted RBP19.46■□□□□ 0.71
HDAC6-208ENST00000438518 CDH5P33151 784 aaPredicted RBP19.46■□□□□ 0.71
HDAC6-208ENST00000438518 PLA2G4AP47712 749 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 SNX16P57768 344 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 COL19A1Q14993 1142 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 VEPH1Q14D04 833 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 PPM1LQ5SGD2 360 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 E4F1Q66K89 784 aaPredicted RBP19.46■□□□□ 0.71
HDAC6-208ENST00000438518 HGSNATQ68CP4 663 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 ITIH5Q86UX2 942 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 TTC30AQ86WT1 665 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 SPC24Q8NBT2 197 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 TMEM35BQ8NCS4 154 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 CMASQ8NFW8 434 aaPredicted RBP19.46■□□□□ 0.71
HDAC6-208ENST00000438518 SLC7A14Q8TBB6 771 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 PDLIM2Q96JY6 352 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 HSFY1Q96LI6 401 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 LPIN3Q9BQK8 851 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 RHOBTB2Q9BYZ6 727 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 CRISPLD1Q9H336 500 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 SFXN1Q9H9B4 322 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 COMMD8Q9NX08 183 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 MTMR10Q9NXD2 777 aa19.46■□□□□ 0.71
HDAC6-208ENST00000438518 SEC24AO95486 1093 aa19.45■□□□□ 0.7
HDAC6-208ENST00000438518 FOSL2P15408 326 aa19.45■□□□□ 0.7
HDAC6-208ENST00000438518 GPD2P43304 727 aa19.45■□□□□ 0.7
HDAC6-208ENST00000438518 EPHB3P54753 998 aa19.45■□□□□ 0.7
HDAC6-208ENST00000438518 FMO1Q01740 532 aa19.45■□□□□ 0.7
HDAC6-208ENST00000438518 MAPK8IP2Q13387 824 aaPredicted RBP19.45■□□□□ 0.7
HDAC6-208ENST00000438518 ELMOD1Q8N336 334 aa19.45■□□□□ 0.7
HDAC6-208ENST00000438518 MSANTD4Q8NCY6 345 aa19.45■□□□□ 0.7
HDAC6-208ENST00000438518 SLC35F5Q8WV83 523 aa19.45■□□□□ 0.7
HDAC6-208ENST00000438518 MYLIPQ8WY64 445 aa19.45■□□□□ 0.7
HDAC6-208ENST00000438518 KCTD13Q8WZ19 329 aa19.45■□□□□ 0.7
HDAC6-208ENST00000438518 GUCD1Q96NT3 240 aa19.45■□□□□ 0.7
HDAC6-208ENST00000438518 SYT11Q9BT88 431 aa19.45■□□□□ 0.7
HDAC6-208ENST00000438518 MIS12Q9H081 205 aa19.45■□□□□ 0.7
HDAC6-208ENST00000438518 SLC27A5Q9Y2P5 690 aa19.45■□□□□ 0.7
HDAC6-208ENST00000438518 SPDYE4A6NLX3 237 aa19.44■□□□□ 0.7
HDAC6-208ENST00000438518 F8VP50 259 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms