RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 CKMP06732 381 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 CSH1P0DML2 217 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 CSH2P0DML3 217 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 HAPLN1P10915 354 aaPredicted RBP8.34□□□□□ -1.07
VPS50-204ENST00000438395 CHRNB1P11230 501 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 ATF6P18850 670 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 CNR2P34972 360 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 FNTBP49356 437 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 GRIN1Q05586 938 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 MYO1EQ12965 1108 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 FZD5Q13467 585 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 PON2Q15165 354 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 L1TD1Q5T7N2 865 aaKnown RBP8.34□□□□□ -1.07
VPS50-204ENST00000438395 Q6ZS52 159 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 ZNF720Q7Z2F6 126 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 LONP2Q86WA8 852 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 SPATA2LQ8IUW3 424 aaPredicted RBP8.34□□□□□ -1.07
VPS50-204ENST00000438395 BRSK2Q8IWQ3 736 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 CCDC65Q8IXS2 484 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 CMTM8Q8IZV2 173 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 TMEM86AQ8N2M4 240 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 SYNPOQ8N3V7 929 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 LRRC52Q8N7C0 313 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 MAB21L3Q8N8X9 362 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 NELL1Q92832 810 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 RSPRY1Q96DX4 576 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 SAAL1Q96ER3 474 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 PI4K2AQ9BTU6 479 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 C1QTNF2Q9BXJ5 285 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 LRRC3Q9BY71 257 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 LRRC27Q9C0I9 530 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 SMG9Q9H0W8 520 aaKnown RBP8.34□□□□□ -1.07
VPS50-204ENST00000438395 TRPC7Q9HCX4 862 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 ABCB6Q9NP58 842 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 GTSE1Q9NYZ3 720 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 ITGA11Q9UKX5 1188 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 AGAP1Q9UPQ3 857 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 SLC8A2Q9UPR5 921 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 CLIC4Q9Y696 253 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 STYXL1Q9Y6J8 313 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 CHD8Q9HCK8 2581 aa8.34□□□□□ -1.07
VPS50-204ENST00000438395 NCANO14594 1321 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 KIAA0391O15091 583 aaKnown RBP8.33□□□□□ -1.08
VPS50-204ENST00000438395 EXTL3O43909 919 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 LRP3O75074 770 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 ATG13O75143 517 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 TNNC2P02585 160 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 GARTP22102 1010 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 WEE1P30291 646 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 NLRP12P59046 1061 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 RBP5P82980 135 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 CACNA1BQ00975 2339 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 TNK2Q07912 1038 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 SPEM2Q0P670 501 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 KCNB1Q14721 858 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 PDGFRLQ15198 375 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 C4orf50Q6ZRC1 276 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 SCN4BQ8IWT1 228 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 EFCAB13Q8IY85 973 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 ADGRF2Q8IZF7 708 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 PDCL2Q8N4E4 241 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 CPA6Q8N4T0 437 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 CSGALNACT2Q8N6G5 542 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 FSIP1Q8NA03 581 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 NETO1Q8TDF5 533 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 LRRC15Q8TF66 581 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 ANKRD36BP1Q96IX9 119 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 FIZ1Q96SL8 496 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 RTKNQ9BST9 563 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 CEP295Q9C0D2 2601 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 TMEM206Q9H813 350 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 OLFML3Q9NRN5 406 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 GKN1Q9NS71 199 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 TDP1Q9NUW8 608 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 PANK4Q9NVE7 773 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 DDX43Q9NXZ2 648 aaKnown RBP8.33□□□□□ -1.08
VPS50-204ENST00000438395 FBXO2Q9UK22 296 aaPredicted RBP8.33□□□□□ -1.08
VPS50-204ENST00000438395 SRPRBQ9Y5M8 271 aaKnown RBP8.33□□□□□ -1.08
VPS50-204ENST00000438395 SNX9Q9Y5X1 595 aa8.33□□□□□ -1.08
VPS50-204ENST00000438395 NOTCH4Q99466 2003 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 DMDP11532 3685 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 TRIP11Q15643 1979 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 TRAV19A0A0A6YYK7 116 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.32□□□□□ -1.08
VPS50-204ENST00000438395 GOLGA8IPA6NC78 632 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 MYMKA6NI61 221 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 SHISA7A6NL88 538 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 GOLGA8JA6NMD2 632 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 TERTO14746 1132 aaKnown RBP8.32□□□□□ -1.08
VPS50-204ENST00000438395 PAPSS2O95340 614 aaPredicted RBP8.32□□□□□ -1.08
VPS50-204ENST00000438395 CCDC192P0DO97 292 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 TDGF1P13385 188 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 ANXA13P27216 316 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 ADSSP30520 456 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 IFNAR2P48551 515 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 LHX1P48742 406 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 PDE6CP51160 858 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 AMPD3Q01432 767 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 NR1H3Q13133 447 aa8.32□□□□□ -1.08
VPS50-204ENST00000438395 RUNX3Q13761 415 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms