RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 NUDT17P0C025 328 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 MRPS6P82932 125 aaKnown RBP27.04■■□□□ 1.92
CPNE1-216ENST00000437340 EMC10Q5UCC4 262 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 ARHGAP17Q68EM7 881 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 RSPH3Q86UC2 560 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 ARFGAP1Q8N6T3 406 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 C12orf29Q8N999 325 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 RAPGEF5Q92565 580 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 SNF8Q96H20 258 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 CCDC114Q96M63 670 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 DNAI2Q9GZS0 605 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 TSPYL1Q9H0U9 437 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 KLHL11Q9NVR0 708 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 PDCD11Q14690 1871 aaKnown RBP27.04■■□□□ 1.92
CPNE1-216ENST00000437340 A6NNZ2 444 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 PGK1P00558 417 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 RPLP2P05387 115 aaKnown RBP27.04■■□□□ 1.92
CPNE1-216ENST00000437340 RARBP10826 455 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 CDKN2BP42772 138 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 SNX16P57768 344 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 SOWAHAQ2M3V2 549 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 TUBB8Q3ZCM7 444 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 PPP1R26Q5T8A7 1209 aaPredicted RBP27.04■■□□□ 1.92
CPNE1-216ENST00000437340 FAM102AQ5T9C2 384 aaPredicted RBP27.04■■□□□ 1.92
CPNE1-216ENST00000437340 MAP3K21Q5TCX8 1036 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 TXNRD3NBQ6F5E7 133 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 FAM228AQ86W67 206 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 CCDC89Q8N998 374 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 SMG8Q8ND04 991 aaKnown RBP27.04■■□□□ 1.92
CPNE1-216ENST00000437340 PXYLP1Q8TE99 480 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 STK32AQ8WU08 396 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 RNF39Q9H2S5 420 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 ASNSD1Q9NWL6 643 aa27.04■■□□□ 1.92
CPNE1-216ENST00000437340 LRRD1A4D1F6 860 aa27.03■■□□□ 1.92
CPNE1-216ENST00000437340 IVDP26440 423 aa27.03■■□□□ 1.92
CPNE1-216ENST00000437340 PCK1P35558 622 aa27.03■■□□□ 1.92
CPNE1-216ENST00000437340 ACOT1Q86TX2 421 aa27.03■■□□□ 1.92
CPNE1-216ENST00000437340 BBOF1Q8ND07 529 aa27.03■■□□□ 1.92
CPNE1-216ENST00000437340 CCHCR1Q8TD31 782 aa27.03■■□□□ 1.92
CPNE1-216ENST00000437340 HESX1Q9UBX0 185 aa27.03■■□□□ 1.92
CPNE1-216ENST00000437340 TRPV2Q9Y5S1 764 aa27.03■■□□□ 1.92
CPNE1-216ENST00000437340 FRMPD3Q5JV73 1810 aa27.03■■□□□ 1.92
CPNE1-216ENST00000437340 KPNA7A9QM74 516 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 LIASO43766 372 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 RNF8O76064 485 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 RARGP13631 454 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 KRT10P13645 584 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 CAPN2P17655 700 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 TAF6P49848 677 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 ZNF143P52747 638 aaPredicted RBP27.02■■□□□ 1.92
CPNE1-216ENST00000437340 SKOR1P84550 965 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 NBPF20Q3BBV1 942 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 LIMS2Q7Z4I7 341 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 EMC1Q8N766 993 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 OR6B3Q8NGW1 331 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 SLC4A5Q9BY07 1137 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 KLK14Q9P0G3 267 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 SCN10AQ9Y5Y9 1956 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 C3orf70A6NLC5 250 aaPredicted RBP27.02■■□□□ 1.92
CPNE1-216ENST00000437340 E5RJQ4 531 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 CAPN15O75808 1086 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 ATF2P15336 505 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 ARHGEF6Q15052 776 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 TAZQ16635 292 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 SV2CQ496J9 727 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 KAZNQ674X7 775 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 TWF2Q6IBS0 349 aaKnown RBP27.02■■□□□ 1.92
CPNE1-216ENST00000437340 RHBDF2Q6PJF5 856 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 ZNF365Q70YC5 407 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 CRYBG2Q8N1P7 616 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 CNPY3Q9BT09 278 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 EPB41L4BQ9H329 900 aa27.02■■□□□ 1.92
CPNE1-216ENST00000437340 DRG1Q9Y295 367 aaKnown RBP27.02■■□□□ 1.92
CPNE1-216ENST00000437340 A8MXQ7 604 aa27.01■■□□□ 1.91
CPNE1-216ENST00000437340 SHOX2O60902 331 aaPredicted RBP27.01■■□□□ 1.91
CPNE1-216ENST00000437340 ADCY2Q08462 1091 aa27.01■■□□□ 1.91
CPNE1-216ENST00000437340 AGBL2Q5U5Z8 902 aa27.01■■□□□ 1.91
CPNE1-216ENST00000437340 OR6B2Q6IFH4 312 aa27.01■■□□□ 1.91
CPNE1-216ENST00000437340 TMEM110Q86TL2 294 aa27.01■■□□□ 1.91
CPNE1-216ENST00000437340 OR2W6PQ8NHA6 318 aa27.01■■□□□ 1.91
CPNE1-216ENST00000437340 BEGAINQ9BUH8 593 aa27.01■■□□□ 1.91
CPNE1-216ENST00000437340 TRAIPQ9BWF2 469 aa27.01■■□□□ 1.91
CPNE1-216ENST00000437340 FRMD8P1Q9BZ68 369 aaPredicted RBP27.01■■□□□ 1.91
CPNE1-216ENST00000437340 NME7Q9Y5B8 376 aa27.01■■□□□ 1.91
CPNE1-216ENST00000437340 CDY2AQ9Y6F7 541 aa27.01■■□□□ 1.91
CPNE1-216ENST00000437340 TP73O15350 636 aa27■■□□□ 1.91
CPNE1-216ENST00000437340 ADAMTS4O75173 837 aa27■■□□□ 1.91
CPNE1-216ENST00000437340 GPD1P21695 349 aa27■■□□□ 1.91
CPNE1-216ENST00000437340 IL1R2P27930 398 aa27■■□□□ 1.91
CPNE1-216ENST00000437340 BYSLQ13895 437 aaKnown RBP27■■□□□ 1.91
CPNE1-216ENST00000437340 KCTD16Q68DU8 428 aa27■■□□□ 1.91
CPNE1-216ENST00000437340 CXCL17Q6UXB2 119 aa27■■□□□ 1.91
CPNE1-216ENST00000437340 FAM183BPQ6ZVS7 135 aa27■■□□□ 1.91
CPNE1-216ENST00000437340 RPAINQ86UA6 219 aa27■■□□□ 1.91
CPNE1-216ENST00000437340 TTC30AQ86WT1 665 aa27■■□□□ 1.91
CPNE1-216ENST00000437340 ZDHHC17Q8IUH5 632 aa27■■□□□ 1.91
CPNE1-216ENST00000437340 SLC35F5Q8WV83 523 aa27■■□□□ 1.91
CPNE1-216ENST00000437340 KBTBD7Q8WVZ9 684 aa27■■□□□ 1.91
CPNE1-216ENST00000437340 XPNPEP3Q9NQH7 507 aa27■■□□□ 1.91
CPNE1-216ENST00000437340 CHST12Q9NRB3 414 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms