RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 SDK1Q7Z5N4 2213 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-203ENST00000435759 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-203ENST00000435759 SOBPA7XYQ1 873 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 K7ELQ4 463 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-203ENST00000435759 RNF40O75150 1001 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 PPP6R2O75170 966 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 TNNC2P02585 160 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 DLATP10515 647 aaKnown RBP14.6□□□□□ -0.07
PTPN7-203ENST00000435759 HDCP19113 662 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 PCSK1P29120 753 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 CNR2P34972 360 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 GNL1P36915 607 aaPredicted RBP14.6□□□□□ -0.07
PTPN7-203ENST00000435759 CACNA2D1P54289 1103 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 MYO1EQ12965 1108 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 MTF1Q14872 753 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 ZNF77Q15935 545 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 CEP68Q76N32 757 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 KBTBD6Q86V97 674 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 SH3RF2Q8TEC5 729 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 OSCP1Q8WVF1 389 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 SCFD1Q8WVM8 642 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 CCDC127Q96BQ5 260 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 MMS19Q96T76 1030 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 RNF38Q9H0F5 515 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 AGPAT3Q9NRZ7 376 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 TMEM30AQ9NV96 361 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 ZMYM5Q9UJ78 669 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 CDV3Q9UKY7 258 aaKnown RBP14.6□□□□□ -0.07
PTPN7-203ENST00000435759 CDH9Q9ULB4 789 aa14.6□□□□□ -0.07
PTPN7-203ENST00000435759 TRAV19A0A0A6YYK7 116 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 POLR2DO15514 142 aaKnown RBP14.59□□□□□ -0.07
PTPN7-203ENST00000435759 USP17L7P0C7H9 530 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 WARSP23381 471 aaKnown RBP14.59□□□□□ -0.07
PTPN7-203ENST00000435759 GRIK1P39086 918 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 MAGEA11P43364 429 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 CYP2J2P51589 502 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 ASIC1P78348 528 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 CYP27A1Q02318 531 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 FAM160A1Q05DH4 1040 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 PDGFRLQ15198 375 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 CSRP2Q16527 193 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 EML3Q32P44 896 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 SPATA18Q8TC71 538 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 FUBP3Q96I24 572 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTPN7-203ENST00000435759 P2RY13Q9BPV8 354 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 ARRDC1-AS1Q9H2J1 176 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 DPEP3Q9H4B8 488 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 KIF9Q9HAQ2 790 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 RXFP3Q9NSD7 469 aa14.59□□□□□ -0.07
PTPN7-203ENST00000435759 UXTQ9UBK9 157 aaPredicted RBP14.59□□□□□ -0.07
PTPN7-203ENST00000435759 LAMA1P25391 3075 aa14.58□□□□□ -0.07
PTPN7-203ENST00000435759 CLDN5O00501 218 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 DCLK1O15075 740 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 KIAA0391O15091 583 aaKnown RBP14.58□□□□□ -0.08
PTPN7-203ENST00000435759 CUTAO60888 179 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 CKMP06732 381 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 TNNI1P19237 187 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 SDHBP21912 280 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 CASP4P49662 377 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 MYL6P60660 151 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 CYP24A1Q07973 514 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 EHHADHQ08426 723 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 SF3A2Q15428 464 aaKnown RBP14.58□□□□□ -0.08
PTPN7-203ENST00000435759 SURF1Q15526 300 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 SNRNP35Q16560 246 aaKnown RBP14.58□□□□□ -0.08
PTPN7-203ENST00000435759 MDH1BQ5I0G3 518 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 FAM26FQ5R3K3 315 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 CNNM4Q6P4Q7 775 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 PRR23CQ6ZRP0 262 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.58□□□□□ -0.08
PTPN7-203ENST00000435759 WDR49Q8IV35 697 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 GRAMD1CQ8IYS0 662 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 IQUBQ8NA54 791 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 MYCBPAPQ8TBZ2 947 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 PLEKHO2Q8TD55 490 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 PCED1BQ96HM7 432 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 SPATA17Q96L03 361 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 ZNF396Q96N95 335 aaPredicted RBP14.58□□□□□ -0.08
PTPN7-203ENST00000435759 HHIPQ96QV1 700 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 RTKNQ9BST9 563 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 LRRC27Q9C0I9 530 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 SMOC1Q9H4F8 434 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 SLC39A2Q9NP94 309 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 SLC8A2Q9UPR5 921 aa14.58□□□□□ -0.08
PTPN7-203ENST00000435759 R3HCC1Q9Y3T6 440 aaKnown RBP14.58□□□□□ -0.08
PTPN7-203ENST00000435759 ZNF840PA6NDX5 716 aa14.57□□□□□ -0.08
PTPN7-203ENST00000435759 SCAMP3O14828 347 aaKnown RBP14.57□□□□□ -0.08
PTPN7-203ENST00000435759 SLC30A4O14863 429 aa14.57□□□□□ -0.08
PTPN7-203ENST00000435759 EIF3DO15371 548 aaKnown RBP eCLIP14.57□□□□□ -0.08
PTPN7-203ENST00000435759 ATG13O75143 517 aa14.57□□□□□ -0.08
PTPN7-203ENST00000435759 RPP40O75818 363 aaKnown RBP14.57□□□□□ -0.08
PTPN7-203ENST00000435759 PTPN1P18031 435 aaKnown RBP14.57□□□□□ -0.08
PTPN7-203ENST00000435759 DRD1P21728 446 aa14.57□□□□□ -0.08
PTPN7-203ENST00000435759 AFMP43652 599 aa14.57□□□□□ -0.08
PTPN7-203ENST00000435759 IFNAR2P48551 515 aa14.57□□□□□ -0.08
PTPN7-203ENST00000435759 CDH8P55286 799 aa14.57□□□□□ -0.08
PTPN7-203ENST00000435759 AMPD3Q01432 767 aa14.57□□□□□ -0.08
PTPN7-203ENST00000435759 CUL4BQ13620 913 aa14.57□□□□□ -0.08
PTPN7-203ENST00000435759 PSMD6Q15008 389 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms