RNA–Protein interactions for RNA: ENST00000433535.6

RPUSD3-206, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-206ENST00000433535 WARSP23381 471 aaKnown RBP23.33■■□□□ 1.33
RPUSD3-206ENST00000433535 MAGEA11P43364 429 aa23.33■■□□□ 1.33
RPUSD3-206ENST00000433535 CYP27A1Q02318 531 aa23.33■■□□□ 1.33
RPUSD3-206ENST00000433535 SRSF5Q13243 272 aaKnown RBP23.33■■□□□ 1.33
RPUSD3-206ENST00000433535 PSMD6Q15008 389 aa23.33■■□□□ 1.33
RPUSD3-206ENST00000433535 CC2D1AQ6P1N0 951 aaPredicted RBP23.33■■□□□ 1.33
RPUSD3-206ENST00000433535 PKN3Q6P5Z2 889 aa23.33■■□□□ 1.33
RPUSD3-206ENST00000433535 HS2ST1Q7LGA3 356 aa23.33■■□□□ 1.33
RPUSD3-206ENST00000433535 XXYLT1Q8NBI6 393 aa23.33■■□□□ 1.33
RPUSD3-206ENST00000433535 CYP2S1Q96SQ9 504 aa23.33■■□□□ 1.33
RPUSD3-206ENST00000433535 GZF1Q9H116 711 aaPredicted RBP23.33■■□□□ 1.33
RPUSD3-206ENST00000433535 FAM13BQ9NYF5 915 aa23.33■■□□□ 1.33
RPUSD3-206ENST00000433535 MAGEC2Q9UBF1 373 aaPredicted RBP23.33■■□□□ 1.33
RPUSD3-206ENST00000433535 GMEB2Q9UKD1 530 aa23.33■■□□□ 1.33
RPUSD3-206ENST00000433535 CACNA1AO00555 2505 aa23.33■■□□□ 1.33
RPUSD3-206ENST00000433535 HELZP42694 1942 aaKnown RBP23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 TRAV19A0A0A6YYK7 116 aa23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 C2orf78A6NCI8 922 aa23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 SOBPA7XYQ1 873 aa23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 PAPSS2O95340 614 aaPredicted RBP23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 CST3P01034 146 aaPredicted RBP23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 CKMP06732 381 aa23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 BDNFP23560 247 aa23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 DNM1Q05193 864 aaKnown RBP23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 ZNF268Q14587 947 aaPredicted RBP23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 MTF1Q14872 753 aa23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 BMT2Q1RMZ1 405 aa23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 NAIF1Q69YI7 327 aaPredicted RBP23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 FSTL4Q6MZW2 842 aa23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 DGLUCYQ7Z3D6 616 aa23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 PCED1BQ96HM7 432 aa23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 RAB23Q9ULC3 237 aa23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 USP18Q9UMW8 372 aa23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 FRYLO94915 3013 aa23.32■■□□□ 1.32
RPUSD3-206ENST00000433535 FAM160A1Q05DH4 1040 aa23.31■■□□□ 1.32
RPUSD3-206ENST00000433535 USP4Q13107 963 aa23.31■■□□□ 1.32
RPUSD3-206ENST00000433535 ZNF77Q15935 545 aa23.31■■□□□ 1.32
RPUSD3-206ENST00000433535 RSPO4Q2I0M5 234 aaPredicted RBP23.31■■□□□ 1.32
RPUSD3-206ENST00000433535 MDH1BQ5I0G3 518 aa23.31■■□□□ 1.32
RPUSD3-206ENST00000433535 ARL14EPQ8N8R7 260 aaPredicted RBP23.31■■□□□ 1.32
RPUSD3-206ENST00000433535 PARD6AQ9NPB6 346 aa23.31■■□□□ 1.32
RPUSD3-206ENST00000433535 HRO43593 1189 aa23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 USP17L7P0C7H9 530 aa23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 GRIK1P39086 918 aa23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 CASP4P49662 377 aa23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 USP46P62068 366 aa23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 SIM2Q14190 667 aaPredicted RBP23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 PUM1Q14671 1186 aaKnown RBP eCLIP23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 MAPRE1Q15691 268 aaKnown RBP23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 TMEM196Q5HYL7 178 aa23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 VSTM1Q6UX27 236 aa23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 LONP2Q86WA8 852 aa23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 SYNPOQ8N3V7 929 aa23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 ZNF516Q92618 1163 aa23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 SNX25Q9H3E2 840 aa23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 DPEP3Q9H4B8 488 aa23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 DLL3Q9NYJ7 618 aa23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 GCNT4Q9P109 453 aa23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 SERTAD1Q9UHV2 236 aa23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 WNT6Q9Y6F9 365 aa23.3■■□□□ 1.32
RPUSD3-206ENST00000433535 PVALEFA0A1B0GWK0 134 aa23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 EGFP01133 1207 aa23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 TGM1P22735 817 aa23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 ANXA13P27216 316 aa23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 MYL6P60660 151 aa23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 SNRPFP62306 86 aaKnown RBP23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 TNNC1P63316 161 aa23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 GRSF1Q12849 480 aaKnown RBP eCLIP23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 KCNB1Q14721 858 aa23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 PDGFRLQ15198 375 aa23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 KNOP1Q1ED39 458 aaKnown RBP23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 WDR72Q3MJ13 1102 aa23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 LAIR1Q6GTX8 287 aa23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 CEP57L1Q8IYX8 460 aa23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 GPR161Q8N6U8 529 aaKnown RBP23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 FSIP1Q8NA03 581 aa23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 OR6B3Q8NGW1 331 aa23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 MYCBPAPQ8TBZ2 947 aa23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 SPATA17Q96L03 361 aa23.29■■□□□ 1.32
RPUSD3-206ENST00000433535 ATG2BQ96BY7 2078 aa23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 MED19A0JLT2 244 aaPredicted RBP23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 TRDMT1O14717 391 aaKnown RBP23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 ACTN4O43707 911 aaKnown RBP23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 EXOC3O60645 756 aa23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 TACC1O75410 805 aa23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 PDIA4P13667 645 aaKnown RBP23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 GNL1P36915 607 aaPredicted RBP23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 SPEM2Q0P670 501 aa23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 TRPC3Q13507 836 aa23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 DENND5BQ6ZUT9 1274 aa23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 C12orf56Q8IXR9 622 aa23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 CPA6Q8N4T0 437 aa23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 PLEKHO2Q8TD55 490 aa23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 SH3RF2Q8TEC5 729 aa23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 OSCP1Q8WVF1 389 aa23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 FBRSL1Q9HCM7 1045 aaKnown RBP23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 DUS2Q9NX74 493 aaKnown RBP23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 NXF1Q9UBU9 619 aaKnown RBP23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 CFAP45Q9UL16 551 aa23.28■■□□□ 1.32
RPUSD3-206ENST00000433535 F8VP50 259 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms