RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 SPATA31A6Q5VVP1 1343 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 SPATA31A7Q8IWB4 1347 aa12.08□□□□□ -0.48
HMGCS1-202ENST00000433297 MYOCOSA0A1B0GUC4 107 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 GNPATO15228 680 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 MAGEB3O15480 346 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 TMCC1O94876 653 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 PENKP01210 267 aaPredicted RBP12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 CIITAP33076 1130 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 MAP3K10Q02779 954 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 DCUN1D2Q6PH85 259 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 IYDQ6PHW0 289 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 ICA1LQ8NDH6 482 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 FAM172AQ8WUF8 416 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 SRPK1Q96SB4 655 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 WWP1Q9H0M0 922 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 ACSS3Q9H6R3 686 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 MRPL47Q9HD33 250 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 C1orf112Q9NSG2 853 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 XPO7Q9UIA9 1087 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 APPL1Q9UKG1 709 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 BUD23O43709 281 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 TRPA1O75762 1119 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 PEX6Q13608 980 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 TMEM270Q6UE05 265 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 NUDCD3Q8IVD9 361 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 E2F7Q96AV8 911 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 DGCR14Q96DF8 476 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 CFAP36Q96G28 342 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 SLITRK1Q96PX8 696 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 HSFX1Q9UBD0 423 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 MYPNQ86TC9 1320 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 NAV1Q8NEY1 1877 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 CAPN8A6NHC0 703 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 SPDYE16A6NNV3 312 aaPredicted RBP12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 TRIM49D1C9J1S8 452 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 FKBP6O75344 327 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 TGDSO95455 350 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 CLPTM1O96005 669 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 CHN2P52757 468 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 VCPP55072 806 aaKnown RBP12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 PSMC5P62195 406 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 KCNT1Q5JUK3 1230 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 MIER3Q7Z3K6 550 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 CRLF3Q8IUI8 442 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 RCOR2Q8IZ40 523 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 APOPT1Q96IL0 206 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 TMEM8AQ9HCN3 771 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 SHOC2Q9UQ13 582 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 ZNF711Q9Y462 761 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 KAT6AQ92794 2004 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 ARFGEF1Q9Y6D6 1849 aa12.07□□□□□ -0.48
HMGCS1-202ENST00000433297 PROCP04070 461 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 ELK3P41970 407 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 MAGEA10P43363 369 aaPredicted RBP12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 FOLH1Q04609 750 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 MSLNQ13421 630 aaPredicted RBP12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 BMPR2Q13873 1038 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 PAOXQ6QHF9 649 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 RNF111Q6ZNA4 994 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 DENND5BQ6ZUT9 1274 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 CPT1BQ92523 772 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 MKL1Q969V6 931 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 AVENQ9NQS1 362 aaPredicted RBP12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 STRIP2Q9ULQ0 834 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 PLA2G4CQ9UP65 541 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 PCDHB4Q9Y5E5 795 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 PCDHB2Q9Y5E7 798 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 CAPN14A8MX76 684 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 IPO5O00410 1097 aaKnown RBP12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 AVILO75366 819 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 TOM1L1O75674 476 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 RAG1P15918 1043 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 TNNI1P19237 187 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 ADARP55265 1226 aaKnown RBP12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 DLGAP5Q15398 846 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 HSF5Q4G112 596 aaPredicted RBP12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 SPOCD1Q6ZMY3 1216 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 RSPH3Q86UC2 560 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 IGDCC3Q8IVU1 814 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 RBM12BQ8IXT5 1001 aaKnown RBP12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 PPIL6Q8IXY8 311 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 TRIM11Q96F44 468 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 MCEEQ96PE7 176 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 TEKT3Q9BXF9 490 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 SSU72Q9NP77 194 aaKnown RBP12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 HOMER2Q9NSB8 354 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 KCNK4Q9NYG8 393 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 SOX13Q9UN79 622 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 A0A088AWK7 358 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 C15orf38-AP3S2A0A0A6YYH1 394 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 ZMPSTE24O75844 475 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 NDUFB10O96000 172 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 ETV4P43268 484 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 BRDTQ58F21 947 aaPredicted RBP12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 WDR44Q5JSH3 913 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 ARPINQ7Z6K5 226 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 SEPT12Q8IYM1 358 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 FEZF2Q8TBJ5 459 aa12.06□□□□□ -0.48
HMGCS1-202ENST00000433297 ACTL9Q8TC94 416 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms