RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 EZH1Q92800 747 aaPredicted RBP15.26■□□□□ 0.03
SMARCE1-205ENST00000431889 MSANTD3Q96H12 275 aa15.26■□□□□ 0.03
SMARCE1-205ENST00000431889 CHAMP1Q96JM3 812 aa15.26■□□□□ 0.03
SMARCE1-205ENST00000431889 BACH2Q9BYV9 841 aa15.26■□□□□ 0.03
SMARCE1-205ENST00000431889 ZSCAN16Q9H4T2 348 aaPredicted RBP15.26■□□□□ 0.03
SMARCE1-205ENST00000431889 SLC39A2Q9NP94 309 aa15.26■□□□□ 0.03
SMARCE1-205ENST00000431889 SEMA4GQ9NTN9 838 aa15.26■□□□□ 0.03
SMARCE1-205ENST00000431889 DUS2Q9NX74 493 aaKnown RBP15.26■□□□□ 0.03
SMARCE1-205ENST00000431889 INVSQ9Y283 1065 aa15.26■□□□□ 0.03
SMARCE1-205ENST00000431889 HELZP42694 1942 aaKnown RBP15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 CLDN5O00501 218 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 POLR2DO15514 142 aaKnown RBP15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 CLSTN1O94985 981 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 TNNI1P19237 187 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 WEE1P30291 646 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 GJA4P35212 333 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 GRSF1Q12849 480 aaKnown RBP eCLIP15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 MYO1EQ12965 1108 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 ALCAMQ13740 583 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 PKP1Q13835 747 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 SF3A2Q15428 464 aaKnown RBP15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 DUOXA2Q1HG44 320 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 MDH1BQ5I0G3 518 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 MAMSTRQ6ZN01 415 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 TRAPPC11Q7Z392 1133 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 SH3RF2Q8TEC5 729 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 LEO1Q8WVC0 666 aaPredicted RBP15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 ZNF516Q92618 1163 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 INTS4Q96HW7 963 aaKnown RBP15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 IER2Q9BTL4 223 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 TNMDQ9H2S6 317 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 AGPAT3Q9NRZ7 376 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 KBTBD4Q9NVX7 518 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 MAGEC2Q9UBF1 373 aaPredicted RBP15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 SPTBN2O15020 2390 aa15.25■□□□□ 0.03
SMARCE1-205ENST00000431889 TRAV19A0A0A6YYK7 116 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 RETP07949 1114 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 LHX1P48742 406 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 SEC13P55735 322 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 LMNB2Q03252 620 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 ZNF77Q15935 545 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 SNRNP35Q16560 246 aaKnown RBP15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 FAM26FQ5R3K3 315 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 FAM171BQ6P995 826 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 KBTBD6Q86V97 674 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 SFTPA1Q8IWL2 248 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 OR6B3Q8NGW1 331 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 RPLP0P6Q8NHW5 317 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 PCED1BQ96HM7 432 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 ARRDC1-AS1Q9H2J1 176 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 ECT2Q9H8V3 914 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.24■□□□□ 0.031e-6■■■■■ 127.5
SMARCE1-205ENST00000431889 RXFP3Q9NSD7 469 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 TMEM30AQ9NV96 361 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 SMPD4Q9NXE4 827 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 NXF1Q9UBU9 619 aaKnown RBP15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 SLC8A2Q9UPR5 921 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 MYOFQ9NZM1 2061 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 DCLK1O15075 740 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 CCDC192P0DO97 292 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 HDCP19113 662 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 DDX6P26196 483 aaKnown RBP eCLIP15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 PCSK1P29120 753 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 RAP1GAPP47736 663 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 IFNAR2P48551 515 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 CUL4BQ13620 913 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 C1orf228Q6PIY5 440 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 PRR23CQ6ZRP0 262 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 EPM2AIP1Q7L775 607 aaPredicted RBP15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 ZNF507Q8TCN5 953 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 SCFD1Q8WVM8 642 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 P2RY13Q9BPV8 354 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 ABCB6Q9NP58 842 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 ZDHHC4Q9NPG8 344 aa15.24■□□□□ 0.03
SMARCE1-205ENST00000431889 NCOR2Q9Y618 2525 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 F8VP50 259 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 TRDMT1O14717 391 aaKnown RBP15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 USP17L7P0C7H9 530 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 CDH8P55286 799 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 MYL6P60660 151 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 FAM160A1Q05DH4 1040 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 ORC1Q13415 861 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 KCNB1Q14721 858 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 CFAP221Q4G0U5 840 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 SCARA5Q6ZMJ2 495 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 STXBP4Q6ZWJ1 553 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 WDR5BQ86VZ2 330 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 WDR49Q8IV35 697 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 OSCP1Q8WVF1 389 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 TRMT2BQ96GJ1 504 aaKnown RBP15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 MYRFLQ96LU7 910 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 ZNF396Q96N95 335 aaPredicted RBP15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 CNTNAP3BQ96NU0 1288 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 CNTNAP3Q9BZ76 1288 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 RNF38Q9H0F5 515 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 GZF1Q9H116 711 aaPredicted RBP15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 SNX25Q9H3E2 840 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 GCNT4Q9P109 453 aa15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 UXTQ9UBK9 157 aaPredicted RBP15.23■□□□□ 0.03
SMARCE1-205ENST00000431889 CDH9Q9ULB4 789 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms