RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 SNX16P57768 344 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 GDF6Q6KF10 455 aaPredicted RBP13.51□□□□□ -0.25
DDX56-204ENST00000431640 SLC27A1Q6PCB7 646 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 RHBDF2Q6PJF5 856 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 SPOCD1Q6ZMY3 1216 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 GSTA5Q7RTV2 222 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 RNF180Q86T96 592 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 TTC13Q8NBP0 860 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 BCAS4Q8TDM0 211 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 PPP1R16BQ96T49 567 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 NT5C1AQ9BXI3 368 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 ELOVL4Q9GZR5 314 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 DNAI2Q9GZS0 605 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 MCOLN1Q9GZU1 580 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 CRISPLD2Q9H0B8 497 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 SDCBP2Q9H190 292 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 EPN3Q9H201 632 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 ADAMTS10Q9H324 1103 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 EPB41L4BQ9H329 900 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 SEMA4AQ9H3S1 761 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.51□□□□□ -0.25
DDX56-204ENST00000431640 NEU2Q9Y3R4 380 aa13.51□□□□□ -0.25
DDX56-204ENST00000431640 MEFVO15553 781 aaPredicted RBP13.5□□□□□ -0.25
DDX56-204ENST00000431640 RIPK2O43353 540 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 MICAL2O94851 1124 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 GJB6O95452 261 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 RFC1P35251 1148 aaPredicted RBP13.5□□□□□ -0.25
DDX56-204ENST00000431640 GJC1P36383 396 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 ZNF252P-AS1Q0IIN9 211 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 LLGL1Q15334 1064 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 PKN2Q16513 984 aaKnown RBP13.5□□□□□ -0.25
DDX56-204ENST00000431640 PTPN20Q4JDL3 420 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 CYP4A22Q5TCH4 519 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 LCLAT1Q6UWP7 414 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 CATSPER4Q7RTX7 472 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 IPO4Q8TEX9 1081 aaKnown RBP13.5□□□□□ -0.25
DDX56-204ENST00000431640 DIS3LQ8TF46 1054 aaKnown RBP13.5□□□□□ -0.25
DDX56-204ENST00000431640 ATG4AQ8WYN0 398 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 TLCD1Q96CP7 247 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 MCRS1Q96EZ8 462 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 KIF12Q96FN5 646 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 HERPUD2Q9BSE4 406 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 KATNAL1Q9BW62 490 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 FAM107BQ9H098 131 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 SMYD3Q9H7B4 428 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 ASNSD1Q9NWL6 643 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 GTF2IRD1Q9UHL9 959 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 PHF24Q9UPV7 400 aa13.5□□□□□ -0.25
DDX56-204ENST00000431640 MOXD2PA6NHM9 499 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 GOLGA8SH3BPF8 625 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 O00370 1275 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 EBAG9O00559 213 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 RGS16O15492 202 aaPredicted RBP13.49□□□□□ -0.25
DDX56-204ENST00000431640 LIASO43766 372 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 KPNA6O60684 536 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 GPR32O75388 356 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 RNF8O76064 485 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 AGTP01019 485 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 ATF7P17544 494 aaPredicted RBP13.49□□□□□ -0.25
DDX56-204ENST00000431640 HPDP32754 393 aaPredicted RBP13.49□□□□□ -0.25
DDX56-204ENST00000431640 LSP1P33241 339 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 GPD2P43304 727 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 ITGA8P53708 1063 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 OGDHQ02218 1023 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 PDCLQ13371 301 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 DAB2IPQ5VWQ8 1189 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 NOTUMQ6P988 496 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 MFSD7Q6UXD7 560 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 B4GALNT4Q76KP1 1039 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 SPATS2Q86XZ4 545 aaKnown RBP13.49□□□□□ -0.25
DDX56-204ENST00000431640 XYLT1Q86Y38 959 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 RELL1Q8IUW5 271 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 PCSK9Q8NBP7 692 aaKnown RBP13.49□□□□□ -0.25
DDX56-204ENST00000431640 BEST2Q8NFU1 509 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 NCAPGQ9BPX3 1015 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 R3HDM2Q9Y2K5 976 aaKnown RBP13.49□□□□□ -0.25
DDX56-204ENST00000431640 hCG_1818297A0A087WSY0 165 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 DNM1LO00429 736 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 RASGRF2O14827 1237 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 NPTXRO95502 500 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 SETSIPP0DME0 302 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 CYP2C9P11712 490 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 RDXP35241 583 aaKnown RBP13.49□□□□□ -0.25
DDX56-204ENST00000431640 CDKN2BP42772 138 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 MAGOHP61326 146 aaKnown RBP13.49□□□□□ -0.25
DDX56-204ENST00000431640 KIZQ2M2Z5 673 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 ATP13A4Q4VNC1 1196 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 CCDC25Q86WR0 208 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 NME8Q8N427 588 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 LRRC52Q8N7C0 313 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 CENPTQ96BT3 561 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 TWNKQ96RR1 684 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 CPXM1Q96SM3 734 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 TSEN34Q9BSV6 310 aaKnown RBP13.49□□□□□ -0.25
DDX56-204ENST00000431640 RSPH14Q9UHP6 348 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 CYTH4Q9UIA0 394 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 ZNF148Q9UQR1 794 aa13.49□□□□□ -0.25
DDX56-204ENST00000431640 C17orf102A2RUQ5 167 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 LRRD1A4D1F6 860 aa13.48□□□□□ -0.25
DDX56-204ENST00000431640 PI4K2BG5E9Z4 385 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms