RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 FNTBP49356 437 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 MYL6P60660 151 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 RPL10AP62906 217 aaKnown RBP18.29■□□□□ 0.52
CPSF4-203ENST00000430038 MYO1EQ12965 1108 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 SURF1Q15526 300 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 LPAL2Q16609 132 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 ITPRIPL2Q3MIP1 535 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 FSTL4Q6MZW2 842 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 SPEM1Q8N4L4 309 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 PAGE5Q96GU1 130 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 PCED1BQ96HM7 432 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 GCNAQ96QF7 691 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 MMS19Q96T76 1030 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 HINFPQ9BQA5 517 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 PARD6AQ9NPB6 346 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 CDH9Q9ULB4 789 aa18.29■□□□□ 0.52
CPSF4-203ENST00000430038 SMG5Q9UPR3 1016 aaKnown RBP18.29■□□□□ 0.52
CPSF4-203ENST00000430038 KIAA1549LQ6ZVL6 1849 aa18.28■□□□□ 0.52
CPSF4-203ENST00000430038 A0A1B0GVL5 298 aa18.28■□□□□ 0.52
CPSF4-203ENST00000430038 ANTXRLA6NF34 631 aa18.28■□□□□ 0.52
CPSF4-203ENST00000430038 PCSK1P29120 753 aa18.28■□□□□ 0.52
CPSF4-203ENST00000430038 AVPR1AP37288 418 aa18.28■□□□□ 0.52
CPSF4-203ENST00000430038 MAGEA11P43364 429 aa18.28■□□□□ 0.52
CPSF4-203ENST00000430038 CCR3P51677 355 aa18.28■□□□□ 0.52
CPSF4-203ENST00000430038 PLCB2Q00722 1185 aa18.28■□□□□ 0.52
CPSF4-203ENST00000430038 RUNX3Q13761 415 aa18.28■□□□□ 0.52
CPSF4-203ENST00000430038 KNOP1Q1ED39 458 aaKnown RBP18.28■□□□□ 0.52
CPSF4-203ENST00000430038 C12orf56Q8IXR9 622 aa18.28■□□□□ 0.52
CPSF4-203ENST00000430038 ARL14EPQ8N8R7 260 aaPredicted RBP18.28■□□□□ 0.52
CPSF4-203ENST00000430038 MRPS31Q92665 395 aaKnown RBP18.28■□□□□ 0.52
CPSF4-203ENST00000430038 EZH1Q92800 747 aaPredicted RBP18.28■□□□□ 0.52
CPSF4-203ENST00000430038 FUBP3Q96I24 572 aaKnown RBP eCLIP18.28■□□□□ 0.52
CPSF4-203ENST00000430038 MAGEF1Q9HAY2 307 aa18.28■□□□□ 0.52
CPSF4-203ENST00000430038 MAGEC2Q9UBF1 373 aaPredicted RBP18.28■□□□□ 0.52
CPSF4-203ENST00000430038 UBE4BO95155 1302 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 CLDN5O00501 218 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 VNN1O95497 513 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 SLFN14P0C7P3 912 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 DDX6P26196 483 aaKnown RBP eCLIP18.27■□□□□ 0.52
CPSF4-203ENST00000430038 GNL1P36915 607 aaPredicted RBP18.27■□□□□ 0.52
CPSF4-203ENST00000430038 DLG4P78352 724 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 ZNF77Q15935 545 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 WDR72Q3MJ13 1102 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 KMT5BQ4FZB7 885 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 TMEM196Q5HYL7 178 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 MDH1BQ5I0G3 518 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 TDRD10Q5VZ19 366 aaKnown RBP18.27■□□□□ 0.52
CPSF4-203ENST00000430038 MYCBPAPQ8TBZ2 947 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 MSANTD3Q96H12 275 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 FAM126AQ9BYI3 521 aaPredicted RBP18.27■□□□□ 0.52
CPSF4-203ENST00000430038 LINC00597Q9H2U6 94 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 KCTD10Q9H3F6 313 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 TRPC7Q9HCX4 862 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 DMAC2Q9NW81 257 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 THG1LQ9NWX6 298 aaKnown RBP18.27■□□□□ 0.52
CPSF4-203ENST00000430038 FAM13BQ9NYF5 915 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 SPTBN2O15020 2390 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 SPAG17Q6Q759 2223 aa18.27■□□□□ 0.52
CPSF4-203ENST00000430038 LRRIQ3A6PVS8 624 aaPredicted RBP18.26■□□□□ 0.51
CPSF4-203ENST00000430038 TACC1O75410 805 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 EGFP01133 1207 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 HSP90AA1P07900 732 aaKnown RBP18.26■□□□□ 0.51
CPSF4-203ENST00000430038 PFKFB1P16118 471 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 GALK1P51570 392 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 CDH8P55286 799 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 CYP27A1Q02318 531 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 ZNF268Q14587 947 aaPredicted RBP18.26■□□□□ 0.51
CPSF4-203ENST00000430038 DGKKQ5KSL6 1271 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 HEATR6Q6AI08 1181 aaKnown RBP18.26■□□□□ 0.51
CPSF4-203ENST00000430038 ATL3Q6DD88 541 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 PARD3BQ8TEW8 1205 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 SPATA17Q96L03 361 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 IER2Q9BTL4 223 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 B3GNT5Q9BYG0 378 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 RNF38Q9H0F5 515 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 SDCBP2Q9H190 292 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 HPSEQ9Y251 543 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 WNT6Q9Y6F9 365 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 MYH10P35580 1976 aa18.26■□□□□ 0.51
CPSF4-203ENST00000430038 SOBPA7XYQ1 873 aa18.25■□□□□ 0.51
CPSF4-203ENST00000430038 TRDMT1O14717 391 aaKnown RBP18.25■□□□□ 0.51
CPSF4-203ENST00000430038 PAPSS2O95340 614 aaPredicted RBP18.25■□□□□ 0.51
CPSF4-203ENST00000430038 C4BPAP04003 597 aaKnown RBP18.25■□□□□ 0.51
CPSF4-203ENST00000430038 PRR29P0C7W0 189 aa18.25■□□□□ 0.51
CPSF4-203ENST00000430038 PTPN1P18031 435 aaKnown RBP18.25■□□□□ 0.51
CPSF4-203ENST00000430038 GRIK1P39086 918 aa18.25■□□□□ 0.51
CPSF4-203ENST00000430038 RAP1GAPP47736 663 aa18.25■□□□□ 0.51
CPSF4-203ENST00000430038 SNRPFP62306 86 aaKnown RBP18.25■□□□□ 0.51
CPSF4-203ENST00000430038 CLDN10P78369 228 aa18.25■□□□□ 0.51
CPSF4-203ENST00000430038 LRRC32Q14392 662 aa18.25■□□□□ 0.51
CPSF4-203ENST00000430038 C1orf220Q5T0J3 134 aa18.25■□□□□ 0.51
CPSF4-203ENST00000430038 PAQR9Q6ZVX9 377 aa18.25■□□□□ 0.51
CPSF4-203ENST00000430038 TTC16Q8NEE8 873 aa18.25■□□□□ 0.51
CPSF4-203ENST00000430038 OR6B3Q8NGW1 331 aa18.25■□□□□ 0.51
CPSF4-203ENST00000430038 FNBP1Q96RU3 617 aa18.25■□□□□ 0.51
CPSF4-203ENST00000430038 ZNF518BQ9C0D4 1074 aa18.25■□□□□ 0.51
CPSF4-203ENST00000430038 SMYD3Q9H7B4 428 aa18.25■□□□□ 0.51
CPSF4-203ENST00000430038 NCDNQ9UBB6 729 aa18.25■□□□□ 0.51
CPSF4-203ENST00000430038 UXTQ9UBK9 157 aaPredicted RBP18.25■□□□□ 0.51
CPSF4-203ENST00000430038 NXF1Q9UBU9 619 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms