RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 RTN2O75298 545 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 DNAJB1P25685 340 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 MATR3P43243 847 aaKnown RBP eCLIP10.12□□□□□ -0.79
NEDD1-203ENST00000429527 HYAL1Q12794 435 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 SLC27A1Q6PCB7 646 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 RTL10Q7L3V2 364 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 ZNF558Q96NG5 402 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 FOXP3Q9BZS1 431 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 DDX47Q9H0S4 455 aaKnown RBP10.12□□□□□ -0.79
NEDD1-203ENST00000429527 HAUS2Q9NVX0 235 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 AMACRQ9UHK6 382 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 RASAL2Q9UJF2 1139 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 TNFSF13BQ9Y275 285 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 PCDHB2Q9Y5E7 798 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 ANKRD65E5RJM6 399 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 GRM6O15303 877 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 RIPK2O43353 540 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 MARCH6O60337 910 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 ABHD2P08910 425 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 PAX3P23760 479 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 CAV1Q03135 178 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 CBX2Q14781 532 aaPredicted RBP10.12□□□□□ -0.79
NEDD1-203ENST00000429527 CRYMQ14894 314 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 NOMO2Q5JPE7 1267 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 ALKAL1Q6UXT8 129 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 BSNDQ8WZ55 320 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 TMEM143Q96AN5 459 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 UBE2ZQ9H832 354 aaPredicted RBP10.12□□□□□ -0.79
NEDD1-203ENST00000429527 CTNNAL1Q9UBT7 734 aa10.12□□□□□ -0.79
NEDD1-203ENST00000429527 TPX2Q9ULW0 747 aaKnown RBP10.12□□□□□ -0.79
NEDD1-203ENST00000429527 NPHP3-ACAD11A0A0J9YXS1 232 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 GOLGA6L10A0A0M3HER8 536 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 ZBTB39O15060 712 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 MAGOHP61326 146 aaKnown RBP10.11□□□□□ -0.79
NEDD1-203ENST00000429527 CNGA2Q16280 664 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 FAM102BQ5T8I3 360 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 POTEGQ6S5H5 508 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 APBB1IPQ7Z5R6 666 aaPredicted RBP10.11□□□□□ -0.79
NEDD1-203ENST00000429527 CCDC197Q8NCU1 140 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 ALG3Q92685 438 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 MAGOHBQ96A72 148 aaKnown RBP10.11□□□□□ -0.79
NEDD1-203ENST00000429527 SPAG5Q96R06 1193 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 PSMB7Q99436 277 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 RUSC1Q9BVN2 902 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 INTS2Q9H0H0 1204 aaKnown RBP10.11□□□□□ -0.79
NEDD1-203ENST00000429527 PDZD7Q9H5P4 517 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 RXFP1Q9HBX9 757 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 SPG21Q9NZD8 308 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 ARHGEF35A5YM69 484 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 FAM155BO75949 473 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 CYP4A11Q02928 519 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 DHX9Q08211 1270 aaKnown RBP10.11□□□□□ -0.79
NEDD1-203ENST00000429527 BNIP1Q12981 228 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 IFT88Q13099 833 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 SMAD4Q13485 552 aaKnown RBP10.11□□□□□ -0.79
NEDD1-203ENST00000429527 KYAT1Q16773 422 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 C1orf220Q5T0J3 134 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 RNF43Q68DV7 783 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 CATSPER4Q7RTX7 472 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 TDRPQ86YL5 185 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 KLHL7Q8IXQ5 586 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 COLGALT2Q8IYK4 626 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 FAM71AQ8IYT1 594 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 ZDHHC14Q8IZN3 488 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 KLHL23Q8NBE8 558 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 RNF149Q8NC42 400 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 SLC22A17Q8WUG5 538 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 SUSD6Q92537 303 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 FAM161BQ96MY7 647 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 BATF3Q9NR55 127 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 ARHGEF3Q9NR81 526 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 SSX2IPQ9Y2D8 614 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 ARIH1Q9Y4X5 557 aaPredicted RBP10.11□□□□□ -0.79
NEDD1-203ENST00000429527 GRXCR2A6NFK2 248 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 TBKBP1A7MCY6 615 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 SNX3O60493 162 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 FGF18O76093 207 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 ATP6V1G2O95670 118 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 IVDP26440 423 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 MAN1A1P33908 653 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 LTBRP36941 435 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 KCNT2Q6UVM3 1135 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 ZPBP2Q6X784 338 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 ZBTB8OSQ8IWT0 167 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 HACE1Q8IYU2 909 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 RIBC1Q8N443 379 aaPredicted RBP10.11□□□□□ -0.79
NEDD1-203ENST00000429527 CMASQ8NFW8 434 aaPredicted RBP10.11□□□□□ -0.79
NEDD1-203ENST00000429527 FAM212AQ96EL1 285 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 AGPAT1Q99943 283 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 COL25A1Q9BXS0 654 aaPredicted RBP10.11□□□□□ -0.79
NEDD1-203ENST00000429527 LRRC4CQ9HCJ2 640 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 TLR9Q9NR96 1032 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 AGPAT3Q9NRZ7 376 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 UVRAGQ9P2Y5 699 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 NOVA2Q9UNW9 492 aaKnown RBP10.11□□□□□ -0.79
NEDD1-203ENST00000429527 NR2E1Q9Y466 385 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 IPPQ9Y573 584 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 STYXL1Q9Y6J8 313 aa10.11□□□□□ -0.79
NEDD1-203ENST00000429527 RFXAPO00287 272 aa10.1□□□□□ -0.79
NEDD1-203ENST00000429527 ARF4P18085 180 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms