RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 CTHP32929 405 aa19.65■□□□□ 0.74
PSPC1-202ENST00000427943 GNL1P36915 607 aaPredicted RBP19.65■□□□□ 0.74
PSPC1-202ENST00000427943 MTAPQ13126 283 aa19.65■□□□□ 0.74
PSPC1-202ENST00000427943 ZNF699Q32M78 642 aa19.65■□□□□ 0.74
PSPC1-202ENST00000427943 ZC3H14Q6PJT7 736 aaKnown RBP19.65■□□□□ 0.74
PSPC1-202ENST00000427943 TXNDC11Q6PKC3 985 aa19.65■□□□□ 0.74
PSPC1-202ENST00000427943 TSSK4Q6SA08 328 aa19.65■□□□□ 0.74
PSPC1-202ENST00000427943 CCDC47Q96A33 483 aaKnown RBP19.65■□□□□ 0.74
PSPC1-202ENST00000427943 MYRFLQ96LU7 910 aa19.65■□□□□ 0.74
PSPC1-202ENST00000427943 CHRDQ9H2X0 955 aa19.65■□□□□ 0.74
PSPC1-202ENST00000427943 C8orf33Q9H7E9 229 aaPredicted RBP19.65■□□□□ 0.74
PSPC1-202ENST00000427943 LMAN1LQ9HAT1 526 aa19.65■□□□□ 0.74
PSPC1-202ENST00000427943 ZMYM5Q9UJ78 669 aa19.65■□□□□ 0.74
PSPC1-202ENST00000427943 FBXO4Q9UKT5 387 aa19.65■□□□□ 0.74
PSPC1-202ENST00000427943 MAPK8IP1Q9UQF2 711 aa19.65■□□□□ 0.74
PSPC1-202ENST00000427943 ATG2BQ96BY7 2078 aa19.64■□□□□ 0.74
PSPC1-202ENST00000427943 A8MXQ7 604 aa19.64■□□□□ 0.73
PSPC1-202ENST00000427943 SPECC1L-ADORA2AF8WAN1 911 aa19.64■□□□□ 0.73
PSPC1-202ENST00000427943 RHOBTB3O94955 611 aa19.64■□□□□ 0.73
PSPC1-202ENST00000427943 VNN1O95497 513 aa19.64■□□□□ 0.73
PSPC1-202ENST00000427943 ATICP31939 592 aa19.64■□□□□ 0.73
PSPC1-202ENST00000427943 GRIK1P39086 918 aa19.64■□□□□ 0.73
PSPC1-202ENST00000427943 RAP1GAPP47736 663 aa19.64■□□□□ 0.73
PSPC1-202ENST00000427943 NCOA4Q13772 614 aa19.64■□□□□ 0.73
PSPC1-202ENST00000427943 VSTM1Q6UX27 236 aa19.64■□□□□ 0.73
PSPC1-202ENST00000427943 MON1AQ86VX9 555 aa19.64■□□□□ 0.73
PSPC1-202ENST00000427943 ADSSL1Q8N142 457 aa19.64■□□□□ 0.73
PSPC1-202ENST00000427943 TTC16Q8NEE8 873 aa19.64■□□□□ 0.73
PSPC1-202ENST00000427943 MYCBPAPQ8TBZ2 947 aa19.64■□□□□ 0.73
PSPC1-202ENST00000427943 MSANTD3Q96H12 275 aa19.64■□□□□ 0.73
PSPC1-202ENST00000427943 RBM12Q9NTZ6 932 aaKnown RBP19.64■□□□□ 0.73
PSPC1-202ENST00000427943 TDP1Q9NUW8 608 aa19.64■□□□□ 0.73
PSPC1-202ENST00000427943 THG1LQ9NWX6 298 aaKnown RBP19.64■□□□□ 0.73
PSPC1-202ENST00000427943 CALUO43852 315 aaPredicted RBP19.63■□□□□ 0.73
PSPC1-202ENST00000427943 ZNF202O95125 648 aa19.63■□□□□ 0.73
PSPC1-202ENST00000427943 C4BPAP04003 597 aaKnown RBP19.63■□□□□ 0.73
PSPC1-202ENST00000427943 CHRNB1P11230 501 aa19.63■□□□□ 0.73
PSPC1-202ENST00000427943 PTPN1P18031 435 aaKnown RBP19.63■□□□□ 0.73
PSPC1-202ENST00000427943 ANXA13P27216 316 aa19.63■□□□□ 0.73
PSPC1-202ENST00000427943 CDH8P55286 799 aa19.63■□□□□ 0.73
PSPC1-202ENST00000427943 CLDN10P78369 228 aa19.63■□□□□ 0.73
PSPC1-202ENST00000427943 PLCB2Q00722 1185 aa19.63■□□□□ 0.73
PSPC1-202ENST00000427943 BECN1Q14457 450 aa19.63■□□□□ 0.73
PSPC1-202ENST00000427943 ZNF667Q5HYK9 610 aa19.63■□□□□ 0.73
PSPC1-202ENST00000427943 WDR44Q5JSH3 913 aa19.63■□□□□ 0.73
PSPC1-202ENST00000427943 TRIM68Q6AZZ1 485 aa19.63■□□□□ 0.73
PSPC1-202ENST00000427943 SLC22A12Q96S37 553 aa19.63■□□□□ 0.73
PSPC1-202ENST00000427943 KIF9Q9HAQ2 790 aa19.63■□□□□ 0.73
PSPC1-202ENST00000427943 PRMT8Q9NR22 394 aaPredicted RBP19.63■□□□□ 0.73
PSPC1-202ENST00000427943 GKN1Q9NS71 199 aa19.63■□□□□ 0.73
PSPC1-202ENST00000427943 KIAA1549LQ6ZVL6 1849 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 WDR87Q6ZQQ6 2873 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 PTPRZ1P23471 2315 aaPredicted RBP19.62■□□□□ 0.73
PSPC1-202ENST00000427943 F8VP50 259 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 CLDN5O00501 218 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 LMNAP02545 664 aaKnown RBP19.62■□□□□ 0.73
PSPC1-202ENST00000427943 CKMP06732 381 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 AP3M2P53677 418 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 CACNA2D1P54289 1103 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 MLLT6P55198 1093 aaPredicted RBP19.62■□□□□ 0.73
PSPC1-202ENST00000427943 USP46P62068 366 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 PON2Q15165 354 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 ITPRIPL2Q3MIP1 535 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 ZNF528Q3MIS6 628 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 RALGPS2Q86X27 583 aaPredicted RBP19.62■□□□□ 0.73
PSPC1-202ENST00000427943 B3GALNT2Q8NCR0 500 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 SPATA17Q96L03 361 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 CYP2S1Q96SQ9 504 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 ZNF518BQ9C0D4 1074 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 SDCBP2Q9H190 292 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 VRTNQ9H8Y1 702 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 HPS4Q9NQG7 708 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 TMEM30AQ9NV96 361 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 TRAF3IP3Q9Y228 551 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 FRMD4BQ9Y2L6 1034 aa19.62■□□□□ 0.73
PSPC1-202ENST00000427943 TRAV19A0A0A6YYK7 116 aa19.61■□□□□ 0.73
PSPC1-202ENST00000427943 C2orf78A6NCI8 922 aa19.61■□□□□ 0.73
PSPC1-202ENST00000427943 TRIM66O15016 1216 aa19.61■□□□□ 0.73
PSPC1-202ENST00000427943 KIF20AO95235 890 aa19.61■□□□□ 0.73
PSPC1-202ENST00000427943 FAM163BP0C2L3 166 aa19.61■□□□□ 0.73
PSPC1-202ENST00000427943 NR2F2P24468 414 aa19.61■□□□□ 0.73
PSPC1-202ENST00000427943 ZACNQ401N2 412 aa19.61■□□□□ 0.73
PSPC1-202ENST00000427943 C1orf228Q6PIY5 440 aa19.61■□□□□ 0.73
PSPC1-202ENST00000427943 Q6ZS52 159 aa19.61■□□□□ 0.73
PSPC1-202ENST00000427943 DENND5BQ6ZUT9 1274 aa19.61■□□□□ 0.73
PSPC1-202ENST00000427943 ARL14EPQ8N8R7 260 aaPredicted RBP19.61■□□□□ 0.73
PSPC1-202ENST00000427943 TMC2Q8TDI7 906 aa19.61■□□□□ 0.73
PSPC1-202ENST00000427943 TMEM174Q8WUU8 243 aa19.61■□□□□ 0.73
PSPC1-202ENST00000427943 FAM83CQ9BQN1 747 aa19.61■□□□□ 0.73
PSPC1-202ENST00000427943 SEMA4AQ9H3S1 761 aa19.61■□□□□ 0.73
PSPC1-202ENST00000427943 EBF3Q9H4W6 596 aa19.61■□□□□ 0.73
PSPC1-202ENST00000427943 SOBPA7XYQ1 873 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 KINO60870 393 aaKnown RBP19.6■□□□□ 0.73
PSPC1-202ENST00000427943 USP17L7P0C7H9 530 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 TRIM49P0CI25 452 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 TRIM49CP0CI26 452 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 ARSAP15289 507 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 PIK3CAP42336 1068 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 FAM160A1Q05DH4 1040 aa19.6■□□□□ 0.73
PSPC1-202ENST00000427943 IFRD2Q12894 506 aaPredicted RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms