RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 ATP5OP48047 213 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 NOVP48745 357 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 JAG1P78504 1218 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 COG7P83436 770 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 MORF4L2Q15014 288 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 UGCGQ16739 394 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 CTC1Q2NKJ3 1217 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 KLHL38Q2WGJ6 581 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 MROH9Q5TGP6 573 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 APOBEC3HQ6NTF7 200 aaKnown RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 SPOCD1Q6ZMY3 1216 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 RAPH1Q70E73 1250 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 SIAH1Q8IUQ4 282 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 ULK2Q8IYT8 1036 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 EXD1Q8NHP7 514 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 IL31RAQ8NI17 732 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 FAM81AQ8TBF8 368 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 CRYGNQ8WXF5 182 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 TRIM11Q96F44 468 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 MPP4Q96JB8 637 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 TRAPPC9Q96Q05 1148 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 IFT122Q9HBG6 1241 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 ZNF212Q9UDV6 495 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 SLC24A2Q9UI40 661 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 CCPG1Q9ULG6 757 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 CLUHO75153 1309 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 UBE4BO95155 1302 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 IRS2Q9Y4H2 1338 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 DCAF8L1A6NGE4 600 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 KBTBD13C9JR72 458 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 SLC26A4O43511 780 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 PSTPIP1O43586 416 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 HNRNPCL1O60812 293 aaKnown RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 RNASEH1O60930 286 aaKnown RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 SORBS2O94875 1100 aaKnown RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 TOP3BO95985 862 aaKnown RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 ABHD2P08910 425 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 WEE2P0C1S8 567 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 ITGB5P18084 799 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 PSMA2P25787 234 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 NPTX2P47972 431 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 ZNF200P98182 395 aaPredicted RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 BST1Q10588 318 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 KLF1Q13351 362 aaPredicted RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 ORC1Q13415 861 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 MAP7Q14244 749 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 HIC1Q14526 733 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 LIN52Q52LA3 116 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 CASC4Q6P4E1 433 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 DARS2Q6PI48 645 aaKnown RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 GET4Q7L5D6 327 aaPredicted RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 SATL1Q86VE3 508 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 CRLF3Q8IUI8 442 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 RCOR2Q8IZ40 523 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 ALLCQ8N6M5 410 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 EMC1Q8N766 993 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 POM121Q96HA1 1249 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 SLITRK1Q96PX8 696 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 PHF12Q96QT6 1004 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 CDCA7Q9BWT1 371 aaPredicted RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 LNPEPQ9UIQ6 1025 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 ABLIM1O14639 778 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 GRIN3BO60391 1043 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 C6orf222P0C671 652 aaPredicted RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 UNGP13051 313 aaPredicted RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 GTF2H1P32780 548 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 VCPP55072 806 aaKnown RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 CDC16Q13042 620 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 CDO1Q16878 200 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 RNASEH2BQ5TBB1 312 aaKnown RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 C1orf228Q6PIY5 440 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 DENND5BQ6ZUT9 1274 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 TMPRSS6Q8IU80 811 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 KCTD6Q8NC69 237 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 E2F7Q96AV8 911 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 FAF2Q96CS3 445 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 PTCD3Q96EY7 689 aaKnown RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 GCNAQ96QF7 691 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 PANX3Q96QZ0 392 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 SRPK1Q96SB4 655 aaKnown RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 IWS1Q96ST2 819 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 MMP19Q99542 508 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 EBF4Q9BQW3 602 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 PREBQ9HCU5 417 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 PARVAQ9NVD7 372 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 IP6K2Q9UHH9 426 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 SLC7A8Q9UHI5 535 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 MRPL11Q9Y3B7 192 aaKnown RBP7.83□□□□□ -1.16
LINC01108-201ENST00000427276 RREB1Q92766 1687 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 UMODL1Q5DID0 1318 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 MYPNQ86TC9 1320 aa7.83□□□□□ -1.16
LINC01108-201ENST00000427276 LRRIQ4A6NIV6 560 aa7.82□□□□□ -1.16
LINC01108-201ENST00000427276 PPEF1O14829 653 aaPredicted RBP7.82□□□□□ -1.16
LINC01108-201ENST00000427276 RARBP10826 455 aa7.82□□□□□ -1.16
LINC01108-201ENST00000427276 MSX2P35548 267 aaPredicted RBP7.82□□□□□ -1.16
LINC01108-201ENST00000427276 BPIFB4P59827 614 aa7.82□□□□□ -1.16
LINC01108-201ENST00000427276 CYP24A1Q07973 514 aa7.82□□□□□ -1.16
LINC01108-201ENST00000427276 MTMR1Q13613 665 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms