RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CNTRLQ7Z7A1 2325 aa13.42□□□□□ -0.26
SCN1B-202ENST00000415950 VCAM1P19320 739 aa13.42□□□□□ -0.26
SCN1B-202ENST00000415950 PTPN4P29074 926 aa13.42□□□□□ -0.26
SCN1B-202ENST00000415950 PLIN5Q00G26 463 aa13.42□□□□□ -0.26
SCN1B-202ENST00000415950 DCAF4L1Q3SXM0 396 aa13.42□□□□□ -0.26
SCN1B-202ENST00000415950 DUPD1Q68J44 220 aa13.42□□□□□ -0.26
SCN1B-202ENST00000415950 CIAPIN1Q6FI81 312 aa13.42□□□□□ -0.26
SCN1B-202ENST00000415950 CPNE8Q86YQ8 564 aa13.42□□□□□ -0.26
SCN1B-202ENST00000415950 MRPL1Q9BYD6 325 aaKnown RBP13.42□□□□□ -0.26
SCN1B-202ENST00000415950 CEP41Q9BYV8 373 aa13.42□□□□□ -0.26
SCN1B-202ENST00000415950 PKD2L2Q9NZM6 624 aa13.42□□□□□ -0.26
SCN1B-202ENST00000415950 LMCD1Q9NZU5 365 aa13.42□□□□□ -0.26
SCN1B-202ENST00000415950 A0A0A6YYK5 440 aaPredicted RBP13.41□□□□□ -0.26
SCN1B-202ENST00000415950 H0Y626 953 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 KRT36O76013 467 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 TRIM16O95361 564 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 ETS2P15036 469 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 MLH1P40692 756 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 TCHHL1Q5QJ38 904 aaPredicted RBP13.41□□□□□ -0.26
SCN1B-202ENST00000415950 BEST2Q8NFU1 509 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 MAGEB5Q9BZ81 275 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 TMEM39BQ9GZU3 492 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 MRPL42Q9Y6G3 142 aaKnown RBP13.41□□□□□ -0.26
SCN1B-202ENST00000415950 BAG6P46379 1132 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 NPTX2P47972 431 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 TMED10P49755 219 aaKnown RBP13.41□□□□□ -0.26
SCN1B-202ENST00000415950 NCALDP61601 193 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 RPL10AP62906 217 aaKnown RBP13.41□□□□□ -0.26
SCN1B-202ENST00000415950 SCUBE1Q8IWY4 988 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 STK32AQ8WU08 396 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 ZNF75CPQ92670 426 aaPredicted RBP13.41□□□□□ -0.26
SCN1B-202ENST00000415950 MXRA8Q9BRK3 442 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 FBXO6Q9NRD1 293 aaPredicted RBP13.41□□□□□ -0.26
SCN1B-202ENST00000415950 PAIP2BQ9ULR5 123 aaKnown RBP13.41□□□□□ -0.26
SCN1B-202ENST00000415950 FCHO1O14526 889 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 ZFXP17010 805 aaPredicted RBP13.41□□□□□ -0.26
SCN1B-202ENST00000415950 SFNP31947 248 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 SERPINB5P36952 375 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 TRIM60Q495X7 471 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 AFG1LQ8WV93 481 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 PBXIP1Q96AQ6 731 aa13.41□□□□□ -0.26
SCN1B-202ENST00000415950 EXOSC4Q9NPD3 245 aaKnown RBP13.41□□□□□ -0.26
SCN1B-202ENST00000415950 IGSF9BQ9UPX0 1349 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 TMEM247A6NEH6 219 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 E9PBE3 544 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 KLHL41O60662 606 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 NR3C2P08235 984 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 PTDSS1P48651 473 aaKnown RBP13.4□□□□□ -0.26
SCN1B-202ENST00000415950 SLC12A3P55017 1021 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 ITPRIPL1Q6GPH6 555 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 APOL2Q9BQE5 337 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 DCLK3Q9C098 648 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 RNPEPL1Q9HAU8 725 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 SP110Q9HB58 689 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 CHCHD3Q9NX63 227 aaKnown RBP13.4□□□□□ -0.26
SCN1B-202ENST00000415950 FBXO40Q9UH90 709 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 CNOT7Q9UIV1 285 aaKnown RBP13.4□□□□□ -0.26
SCN1B-202ENST00000415950 APPL1Q9UKG1 709 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 KIF20BQ96Q89 1820 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 C2orf71A6NGG8 1288 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 GZMAP12544 262 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 PPARGP37231 505 aaPredicted RBP13.4□□□□□ -0.26
SCN1B-202ENST00000415950 LAMB3Q13751 1172 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 TJAP1Q5JTD0 557 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 FITM2Q8N6M3 262 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 GCOM2Q9BZD3 368 aaPredicted RBP13.4□□□□□ -0.26
SCN1B-202ENST00000415950 QTRT2Q9H974 415 aaKnown RBP13.4□□□□□ -0.26
SCN1B-202ENST00000415950 C2CD2Q9Y426 696 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 RIC1Q4ADV7 1423 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 F8VP50 259 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 NFIBO00712 420 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 HMGCS2P54868 508 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 PLOD1Q02809 727 aaPredicted RBP13.4□□□□□ -0.26
SCN1B-202ENST00000415950 KRT33BQ14525 404 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 PPIL6Q8IXY8 311 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 CKAP2Q8WWK9 683 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 PYDC1Q8WXC3 89 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 CCDC134Q9H6E4 229 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 JPH1Q9HDC5 661 aaPredicted RBP13.4□□□□□ -0.26
SCN1B-202ENST00000415950 FEM1BQ9UK73 627 aa13.4□□□□□ -0.26
SCN1B-202ENST00000415950 ATF5Q9Y2D1 282 aaPredicted RBP13.4□□□□□ -0.26
SCN1B-202ENST00000415950 MAGEA13PA6NCF6 341 aa13.4□□□□□ -0.27
SCN1B-202ENST00000415950 O00370 1275 aa13.4□□□□□ -0.27
SCN1B-202ENST00000415950 ARHGEF9O43307 516 aa13.4□□□□□ -0.27
SCN1B-202ENST00000415950 SNUPNO95149 360 aaKnown RBP13.4□□□□□ -0.27
SCN1B-202ENST00000415950 RARBP10826 455 aa13.4□□□□□ -0.27
SCN1B-202ENST00000415950 NUDT2P50583 147 aa13.4□□□□□ -0.27
SCN1B-202ENST00000415950 ARSHQ5FYA8 562 aa13.4□□□□□ -0.27
SCN1B-202ENST00000415950 ZBTB46Q86UZ6 589 aa13.4□□□□□ -0.27
SCN1B-202ENST00000415950 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.4□□□□□ -0.27
SCN1B-202ENST00000415950 SLIT1O75093 1534 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 ELK3P41970 407 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 GLRBP48167 497 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 PRKCEQ02156 737 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 RBBP7Q16576 425 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 KIZQ2M2Z5 673 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 SPDYAQ5MJ70 313 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 ADCK1Q86TW2 530 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 OR9Q1Q8NGQ5 310 aa13.39□□□□□ -0.27
SCN1B-202ENST00000415950 EPS8L1Q8TE68 723 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms