RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 SQORQ9Y6N5 450 aa3.12□□□□□ -1.91
HMGB3P2-201ENST00000411913 LY6G6EA0A0G2JKS1 128 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 KLHL33A6NCF5 533 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 POC1B-GALNT4F8VUJ3 575 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 ADAM10O14672 748 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 PCDHGA12O60330 932 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 USP1O94782 785 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 NPSP0C0P6 89 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 T-ENOLP0DO92 83 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 TGFB3P10600 412 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 VCAM1P19320 739 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 CHRM3P20309 590 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 LPOP22079 712 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 ZNF280AP59817 542 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 HTRA4P83105 476 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 CDC42EP1Q00587 391 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 HLTFQ14527 1009 aaKnown RBP eCLIP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 ZNF268Q14587 947 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 TREML2Q5T2D2 321 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 VPS53Q5VIR6 699 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 CXorf57Q6NSI4 855 aaKnown RBP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 GADL1Q6ZQY3 521 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 PNMA8AQ86V59 439 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 WDR75Q8IWA0 830 aaKnown RBP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 GALNT4Q8N4A0 578 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 PPM1NQ8N819 430 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 IFI44Q8TCB0 444 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 JPH3Q8WXH2 748 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 SCAMP4Q969E2 229 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 NUP88Q99567 741 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 TRMOQ9BU70 441 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 SERHLQ9NQF3 203 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 DUSP22Q9NRW4 184 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 CCM2LQ9NUG4 571 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 IP6K2Q9UHH9 426 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 SAP30BPQ9UHR5 308 aaKnown RBP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 CCNL1Q9UK58 526 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 PNMA8BQ9ULN7 279 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 ADAMTS5Q9UNA0 930 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 SCAF8Q9UPN6 1271 aaKnown RBP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 PCDHGA9Q9Y5G4 932 aaKnown RBP3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 PCDHGA8Q9Y5G5 932 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 PCDHGA7Q9Y5G6 932 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 PCDHGA6Q9Y5G7 932 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 PCDHGA3Q9Y5H0 932 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 PCDHA13Q9Y5I0 950 aa3.11□□□□□ -1.91
HMGB3P2-201ENST00000411913 WRNQ14191 1432 aaPredicted RBP eCLIP3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 GOLGA6CA6NDK9 693 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 GOLGA6BA6NDN3 693 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 FCHO1O14526 889 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 SLC16A3O15427 465 aaKnown RBP3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 SMAD6O43541 496 aaKnown RBP3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 PRC1O43663 620 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 TLR5O60602 858 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 VPS4BO75351 444 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 IL6RP08887 468 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 CT47B1P0C2W7 299 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 GOLGA6DP0CG33 693 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 LIPAP38571 399 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 CDKN2AP42771 156 aaKnown RBP3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 MTNR1BP49286 362 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 CLCN2P51788 898 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 TBX4P57082 545 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 PSMC1P62191 440 aaKnown RBP3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 RHDQ02161 417 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 GHRHRQ02643 423 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 ODF1Q14990 250 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 LEXMQ3ZCV2 418 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 EFCAB2Q5VUJ9 269 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 FCRL6Q6DN72 434 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 PARS2Q7L3T8 475 aaKnown RBP3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 MIGA2Q7L4E1 593 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 DTX2Q86UW9 622 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 MAGEB6Q8N7X4 407 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 TTC8Q8TAM2 541 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 ZC3H10Q96K80 434 aaKnown RBP3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 ZNF277Q9NRM2 450 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 GOLGA6AQ9NYA3 693 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 GPR45Q9Y5Y3 372 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 RAD54BQ9Y620 910 aa3.1□□□□□ -1.91
HMGB3P2-201ENST00000411913 CCDC194A0A1B0GVG4 234 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 ZNF785A8K8V0 405 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 UBE2Q2LH0YL09 131 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 H7C1Q1 480 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 GTPBP1O00178 669 aaKnown RBP3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 XPOTO43592 962 aaKnown RBP3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 EXOC3O60645 756 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 PF4V1P10720 104 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 CYP2A6P11509 494 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 ATF3P18847 181 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 AGXTP21549 392 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 CYP2C19P33261 490 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 FHL3Q13643 280 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 RAB39AQ14964 217 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 MLC1Q15049 377 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 CLUL1Q15846 466 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 UBAP2Q5T6F2 1119 aaKnown RBP3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 C10orf25Q5T742 122 aa3.09□□□□□ -1.91
HMGB3P2-201ENST00000411913 CCSAPQ6IQ19 270 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms