RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 MTO1Q9Y2Z2 717 aaKnown RBP6.04□□□□□ -1.44
LSM5-206ENST00000409987 TCAF1Q9Y4C2 921 aa6.04□□□□□ -1.44
LSM5-206ENST00000409987 CDY1Q9Y6F8 540 aa6.04□□□□□ -1.44
LSM5-206ENST00000409987 ABCC9O60706 1549 aa6.04□□□□□ -1.44
LSM5-206ENST00000409987 PRAMEF33A0A0G2JMD5 474 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 LGALS16A8MUM7 142 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 PRRT4C9JH25 899 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 hCG_1984214I3L0E3 225 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 NPC1O15118 1278 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 RRP9O43818 475 aaKnown RBP6.03□□□□□ -1.44
LSM5-206ENST00000409987 PRAMEF10O60809 474 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 SKAP2O75563 359 aaPredicted RBP6.03□□□□□ -1.44
LSM5-206ENST00000409987 SOAT2O75908 522 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 NCR1O76036 304 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 TPH1P17752 444 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 LRPAP1P30533 357 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 GRK6P43250 576 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 NDUFV1P49821 464 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 DGKEP52429 567 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 ITGA8P53708 1063 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 CXADRP78310 365 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 KRT17Q04695 432 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 MYO1EQ12965 1108 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 DYRK1AQ13627 763 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 NFIXQ14938 502 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 RAB30Q15771 203 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 PFKFB4Q16877 469 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 GEN1Q17RS7 908 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 MGAT5BQ3V5L5 792 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 ZACNQ401N2 412 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 CD300EQ496F6 205 aaPredicted RBP6.03□□□□□ -1.44
LSM5-206ENST00000409987 CRTC1Q6UUV9 634 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 MMS22LQ6ZRQ5 1243 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 KIAA0408Q6ZU52 694 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 TMPRSS6Q8IU80 811 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 ADGRG5Q8IZF4 528 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 GPATCH11Q8N954 259 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 BPIFB1Q8TDL5 484 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 ZNF384Q8TF68 577 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 SNX27Q96L92 541 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 C20orf173Q96LM9 149 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 RMDN3Q96TC7 470 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 SLC46A2Q9BY10 475 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 AGO4Q9HCK5 861 aaKnown RBP6.03□□□□□ -1.44
LSM5-206ENST00000409987 MRPS17Q9Y2R5 130 aaKnown RBP6.03□□□□□ -1.44
LSM5-206ENST00000409987 PCDHGB3Q9Y5G1 929 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 DGKBQ9Y6T7 804 aa6.03□□□□□ -1.44
LSM5-206ENST00000409987 hCG_1642624A0A1W2PR95 340 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 AQP12BA6NM10 295 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 ZNF500O60304 480 aaPredicted RBP6.02□□□□□ -1.45
LSM5-206ENST00000409987 FAM20BO75063 409 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 LDHCP07864 332 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 ITGALP20701 1170 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 KCNA3P22001 575 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 ZFP36P26651 326 aaKnown RBP6.02□□□□□ -1.45
LSM5-206ENST00000409987 RENBPP51606 427 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 GRM1Q13255 1194 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 KCNAB1Q14722 419 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 R3HDM1Q15032 1099 aaKnown RBP6.02□□□□□ -1.45
LSM5-206ENST00000409987 PRKD1Q15139 912 aaPredicted RBP6.02□□□□□ -1.45
LSM5-206ENST00000409987 CYP2A13Q16696 494 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 ZNF750Q32MQ0 723 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 CACHD1Q5VU97 1274 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 ZNF280DQ6N043 979 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 CACNA2D3Q8IZS8 1091 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.02□□□□□ -1.45
LSM5-206ENST00000409987 ATG16L2Q8NAA4 619 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 CCDC150Q8NCX0 1101 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 CCT6BQ92526 530 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 TMEM125Q96AQ2 219 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 RNF31Q96EP0 1072 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 NELL2Q99435 816 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 PTDSS2Q9BVG9 487 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.02□□□□□ -1.45
LSM5-206ENST00000409987 CXorf36Q9H7Y0 433 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 AKIP1Q9NQ31 210 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 NECTIN3Q9NQS3 549 aa6.02□□□□□ -1.45
LSM5-206ENST00000409987 C9orf78Q9NZ63 289 aaPredicted RBP6.02□□□□□ -1.45
LSM5-206ENST00000409987 SPATA31A3Q5VYP0 1347 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 GAGE12BA1L429 117 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 GAGE12HA6NDE8 117 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 RNASET2O00584 256 aaKnown RBP6.01□□□□□ -1.45
LSM5-206ENST00000409987 PIAS2O75928 621 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 NPTX2P47972 431 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 CCT5P48643 541 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 RPS7P62081 194 aaKnown RBP6.01□□□□□ -1.45
LSM5-206ENST00000409987 SATB1Q01826 763 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 FPGSQ05932 587 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 SPARCL1Q14515 664 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 SLC4A8Q2Y0W8 1093 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 BEAN1Q3B7T3 259 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 PTCHD3Q3KNS1 767 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 RBM20Q5T481 1227 aaKnown RBP6.01□□□□□ -1.45
LSM5-206ENST00000409987 VPS53Q5VIR6 699 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 RAP1GAP2Q684P5 730 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 USP17L6PQ6QN14 398 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 LDHAL6AQ6ZMR3 332 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 TTLL10Q6ZVT0 673 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 TTC9BQ8N6N2 239 aa6.01□□□□□ -1.45
LSM5-206ENST00000409987 SPATA5Q8NB90 893 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms