RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 CSE1LP55060 971 aaKnown RBP12.58□□□□□ -0.4
SHANK2-203ENST00000409161 STX4Q12846 297 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 TRMT6Q9UJA5 497 aaKnown RBP12.58□□□□□ -0.4
SHANK2-203ENST00000409161 VPS4BO75351 444 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 FYNP06241 537 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 UCHL3P15374 230 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 ALDH6A1Q02252 535 aaKnown RBP12.58□□□□□ -0.4
SHANK2-203ENST00000409161 ZCCHC8Q6NZY4 707 aaKnown RBP12.58□□□□□ -0.4
SHANK2-203ENST00000409161 ERO1BQ86YB8 467 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 ZCCHC7Q8N3Z6 543 aaKnown RBP12.58□□□□□ -0.4
SHANK2-203ENST00000409161 OSCP1Q8WVF1 389 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 RORBQ92753 470 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 TSC22D2O75157 780 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 ANXA6P08133 673 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 ITGA8P53708 1063 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 DYNLL1P63167 89 aaKnown RBP12.58□□□□□ -0.4
SHANK2-203ENST00000409161 MAD2L1Q13257 205 aaPredicted RBP12.58□□□□□ -0.4
SHANK2-203ENST00000409161 TFDP3Q5H9I0 405 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 PEG10Q86TG7 708 aaKnown RBP12.58□□□□□ -0.4
SHANK2-203ENST00000409161 ZIM3Q96PE6 472 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 MKNK1Q9BUB5 465 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 RNF17Q9BXT8 1623 aaKnown RBP12.58□□□□□ -0.4
SHANK2-203ENST00000409161 PTPN4P29074 926 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 IFNGR2P38484 337 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 TGM3Q08188 693 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 MAPK7Q13164 816 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 MRNIPQ6NTE8 343 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 MZT2BQ6NZ67 158 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 RTKN2Q8IZC4 609 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 SNRNP27Q8WVK2 155 aaKnown RBP12.58□□□□□ -0.4
SHANK2-203ENST00000409161 IARS2Q9NSE4 1012 aaKnown RBP12.58□□□□□ -0.4
SHANK2-203ENST00000409161 AAR2Q9Y312 384 aaKnown RBP12.58□□□□□ -0.4
SHANK2-203ENST00000409161 USP27XA6NNY8 438 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 RAD51CO43502 376 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 DGAT1O75907 488 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 FASP25445 335 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 KYQ8NBH2 561 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 CYP2E1P05181 493 aaPredicted RBP12.58□□□□□ -0.4
SHANK2-203ENST00000409161 PCSK1P29120 753 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 DMPKQ09013 629 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 TWF1Q12792 350 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 SLC29A2Q14542 456 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 FAM98CQ17RN3 349 aaKnown RBP12.58□□□□□ -0.4
SHANK2-203ENST00000409161 TSGA10IPQ3SY00 556 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 ZNF618Q5T7W0 954 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 TRIM9Q9C026 710 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 IL1RL2Q9HB29 575 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 KLHL11Q9NVR0 708 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 NCKIPSDQ9NZQ3 722 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 PHTF1Q9UMS5 762 aa12.58□□□□□ -0.4
SHANK2-203ENST00000409161 KDM6AO15550 1401 aaPredicted RBP12.58□□□□□ -0.4
SHANK2-203ENST00000409161 SERPIND1P05546 499 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 CENPAP49450 140 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 SFSWAPQ12872 951 aaKnown RBP12.57□□□□□ -0.4
SHANK2-203ENST00000409161 C2CD6Q53TS8 623 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 ZBTB49Q6ZSB9 765 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 TMEM8AQ9HCN3 771 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 VTI1BQ9UEU0 232 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 IGSF9BQ9UPX0 1349 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 E9PBE3 544 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 F8VZ95 297 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 ZNF185O15231 689 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 ALOX15P16050 662 aaPredicted RBP12.57□□□□□ -0.4
SHANK2-203ENST00000409161 CRKP46108 304 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 GALCP54803 685 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 C21orf59P57076 290 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 ZNF467Q7Z7K2 595 aaPredicted RBP12.57□□□□□ -0.4
SHANK2-203ENST00000409161 ARID3BQ8IVW6 561 aaPredicted RBP12.57□□□□□ -0.4
SHANK2-203ENST00000409161 SLC7A14Q8TBB6 771 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 MIEF2Q96C03 454 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 C9orf16Q9BUW7 83 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 SLITRK2Q9H156 845 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 DAPK2Q9UIK4 370 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 RNF112Q9ULX5 631 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 MYRFQ9Y2G1 1151 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 FAM47E-STBD1D6RA91 191 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 BCAP31P51572 246 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 MDM1Q8TC05 714 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 RNPEPQ9H4A4 650 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 PCDHA10Q9Y5I2 948 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 SNX13Q9Y5W8 968 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 PRLRP16471 622 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 AP1S2P56377 157 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 NCOA4Q13772 614 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 EFHC1Q5JVL4 640 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 CCDC80Q76M96 950 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 CCDC33Q8N5R6 958 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 WDR60Q8WVS4 1066 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 TMEM51Q9NW97 253 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 WWOXQ9NZC7 414 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 POLG2Q9UHN1 485 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 MYH13Q9UKX3 1938 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 TAF4O00268 1085 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 RBP1P09455 135 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 MTA1Q13330 715 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 CCDC153Q494R4 210 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 SNX30Q5VWJ9 437 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 IPPQ9Y573 584 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 HEG1Q9ULI3 1381 aa12.57□□□□□ -0.4
SHANK2-203ENST00000409161 MYL3P08590 195 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms