RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 MAGEB2O15479 319 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 MMRN1Q13201 1228 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 DCAF4L1Q3SXM0 396 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 PCNX4Q63HM2 1172 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 LPAR1Q92633 364 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 LRRC7Q96NW7 1537 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 COL15A1P39059 1388 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 ATMINO43313 823 aaPredicted RBP13.44□□□□□ -0.26
RNF43-201ENST00000407977 KRT20P35900 424 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 RGS7P49802 495 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 TRIP4Q15650 581 aaPredicted RBP13.44□□□□□ -0.26
RNF43-201ENST00000407977 FASTKD5Q7L8L6 764 aaKnown RBP13.44□□□□□ -0.26
RNF43-201ENST00000407977 MSL3Q8N5Y2 521 aaKnown RBP13.44□□□□□ -0.26
RNF43-201ENST00000407977 PGM2Q96G03 612 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 RMND5AQ9H871 391 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 AGPAT3Q9NRZ7 376 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 ARAP3Q8WWN8 1544 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 CFAP99D6REC4 459 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 EIF2S1P05198 315 aaKnown RBP13.44□□□□□ -0.26
RNF43-201ENST00000407977 TGM2P21980 687 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 PRKAA2P54646 552 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 FBXW4P57775 412 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 LAMC2Q13753 1193 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 SYTL3Q4VX76 610 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 THUMPD3Q9BV44 507 aaKnown RBP13.44□□□□□ -0.26
RNF43-201ENST00000407977 KCND1Q9NSA2 647 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 MOSPD1Q9UJG1 213 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 ADAM30Q9UKF2 790 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 HPS5Q9UPZ3 1129 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 TRPM1Q7Z4N2 1603 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 RGS5O15539 181 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 CYTH3O43739 400 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 BCL10O95999 233 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 TTLL6Q8N841 843 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 ZNF483Q8TF39 744 aaPredicted RBP13.44□□□□□ -0.26
RNF43-201ENST00000407977 STK32AQ8WU08 396 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 LRRC40Q9H9A6 602 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 KIAA1257Q9ULG3 409 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 SHOC2Q9UQ13 582 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 MAPRE1Q15691 268 aaKnown RBP13.44□□□□□ -0.26
RNF43-201ENST00000407977 PTRHD1Q6GMV3 140 aaKnown RBP13.44□□□□□ -0.26
RNF43-201ENST00000407977 SPATA2LQ8IUW3 424 aaPredicted RBP13.44□□□□□ -0.26
RNF43-201ENST00000407977 KYQ8NBH2 561 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 VPS33AQ96AX1 596 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 SLC10A4Q96EP9 437 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 DNAJC16Q9Y2G8 782 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 RPS6KL1Q9Y6S9 549 aa13.44□□□□□ -0.26
RNF43-201ENST00000407977 TPST1O60507 370 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 FAM200BP0CF97 657 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 CYP19A1P11511 503 aaPredicted RBP13.43□□□□□ -0.26
RNF43-201ENST00000407977 GEMP55040 296 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 PKN2Q16513 984 aaKnown RBP13.43□□□□□ -0.26
RNF43-201ENST00000407977 PRMT9Q6P2P2 845 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 MOXD1Q6UVY6 613 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 CRELD2Q6UXH1 353 aaPredicted RBP13.43□□□□□ -0.26
RNF43-201ENST00000407977 GPR101Q96P66 508 aaPredicted RBP13.43□□□□□ -0.26
RNF43-201ENST00000407977 FAM118BQ9BPY3 351 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 LACRTQ9GZZ8 138 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 KBTBD4Q9NVX7 518 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 PDZK1P1A8MUH7 402 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 CNOT3O75175 753 aaKnown RBP13.43□□□□□ -0.26
RNF43-201ENST00000407977 MAPK1P28482 360 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 PTPN7P35236 360 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 SERPINB5P36952 375 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 MLH1P40692 756 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 RGS2P41220 211 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 PPIDQ08752 370 aaKnown RBP13.43□□□□□ -0.26
RNF43-201ENST00000407977 EMC2Q15006 297 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 ZC2HC1CQ53FD0 456 aaPredicted RBP13.43□□□□□ -0.26
RNF43-201ENST00000407977 MRNIPQ6NTE8 343 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 ZNF333Q96JL9 665 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 OLFM1Q99784 485 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.43□□□□□ -0.26
RNF43-201ENST00000407977 USE1Q9NZ43 259 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 NCKIPSDQ9NZQ3 722 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 RAD54BQ9Y620 910 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 GUCA1CO95843 209 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 RBP1P09455 135 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 TFE3P19532 575 aaPredicted RBP13.43□□□□□ -0.26
RNF43-201ENST00000407977 SARSP49591 514 aaKnown RBP13.43□□□□□ -0.26
RNF43-201ENST00000407977 GTF2H3Q13889 308 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 MYBPC2Q14324 1141 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 C16orf86Q6ZW13 317 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 RMND5BQ96G75 393 aaPredicted RBP13.43□□□□□ -0.26
RNF43-201ENST00000407977 SPATA17Q96L03 361 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 NMRK1Q9NWW6 199 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 GLI1P08151 1106 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 TCF3P15923 654 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 TTKP33981 857 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 CUL2Q13617 745 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 SYNE4Q8N205 404 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 IPMKQ8NFU5 416 aa13.43□□□□□ -0.26
RNF43-201ENST00000407977 UTP6Q9NYH9 597 aaKnown RBP13.43□□□□□ -0.26
RNF43-201ENST00000407977 AAR2Q9Y312 384 aaKnown RBP13.43□□□□□ -0.26
RNF43-201ENST00000407977 VWA5AO00534 786 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 PGK2P07205 417 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 TRIM71Q2Q1W2 868 aaKnown RBP13.42□□□□□ -0.26
RNF43-201ENST00000407977 TTLL9Q3SXZ7 439 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 ACCSLQ4AC99 568 aa13.42□□□□□ -0.26
RNF43-201ENST00000407977 AENQ8WTP8 325 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms