RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 CLDN10P78369 228 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 DPYDQ12882 1025 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 BIRC3Q13489 604 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 MDH1BQ5I0G3 518 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 TXNDC11Q6PKC3 985 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 KRBA2Q6ZNG9 492 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 MON1AQ86VX9 555 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 MYCBPAPQ8TBZ2 947 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 TMEM174Q8WUU8 243 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 ZMYM5Q9UJ78 669 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 FBXO4Q9UKT5 387 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 GPR179Q6PRD1 2367 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 SPECC1L-ADORA2AF8WAN1 911 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 STAU1O95793 577 aaKnown RBP20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 C4BPAP04003 597 aaKnown RBP20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 CHRNB1P11230 501 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 GRIK1P39086 918 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 MAPRE1Q15691 268 aaKnown RBP20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 WDR44Q5JSH3 913 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 ADSSL1Q8N142 457 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 SLC22A12Q96S37 553 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 CHRDQ9H2X0 955 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 C8orf33Q9H7E9 229 aaPredicted RBP20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 TDP1Q9NUW8 608 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 UXTQ9UBK9 157 aaPredicted RBP20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 MAPK8IP1Q9UQF2 711 aa20.6■□□□□ 0.89
SMARCB1-204ENST00000407422 RHOBTB3O94955 611 aa20.59■□□□□ 0.89
SMARCB1-204ENST00000407422 ATICP31939 592 aa20.59■□□□□ 0.89
SMARCB1-204ENST00000407422 CTHP32929 405 aa20.59■□□□□ 0.89
SMARCB1-204ENST00000407422 ZNF528Q3MIS6 628 aa20.59■□□□□ 0.89
SMARCB1-204ENST00000407422 ZC3H14Q6PJT7 736 aaKnown RBP20.59■□□□□ 0.89
SMARCB1-204ENST00000407422 VSTM1Q6UX27 236 aa20.59■□□□□ 0.89
SMARCB1-204ENST00000407422 SYAP1Q96A49 352 aaPredicted RBP20.59■□□□□ 0.89
SMARCB1-204ENST00000407422 CYP2S1Q96SQ9 504 aa20.59■□□□□ 0.89
SMARCB1-204ENST00000407422 SMYD3Q9H7B4 428 aa20.59■□□□□ 0.89
SMARCB1-204ENST00000407422 TRPC7Q9HCX4 862 aa20.59■□□□□ 0.89
SMARCB1-204ENST00000407422 GKN1Q9NS71 199 aa20.59■□□□□ 0.89
SMARCB1-204ENST00000407422 RBM12Q9NTZ6 932 aaKnown RBP20.59■□□□□ 0.89
SMARCB1-204ENST00000407422 THG1LQ9NWX6 298 aaKnown RBP20.59■□□□□ 0.89
SMARCB1-204ENST00000407422 ZNF202O95125 648 aa20.58■□□□□ 0.89
SMARCB1-204ENST00000407422 VNN1O95497 513 aa20.58■□□□□ 0.89
SMARCB1-204ENST00000407422 LMNAP02545 664 aaKnown RBP20.58■□□□□ 0.89
SMARCB1-204ENST00000407422 PTPN1P18031 435 aaKnown RBP20.58■□□□□ 0.89
SMARCB1-204ENST00000407422 CDH8P55286 799 aa20.58■□□□□ 0.89
SMARCB1-204ENST00000407422 USP46P62068 366 aa20.58■□□□□ 0.89
SMARCB1-204ENST00000407422 PLCB2Q00722 1185 aa20.58■□□□□ 0.89
SMARCB1-204ENST00000407422 NCOA4Q13772 614 aa20.58■□□□□ 0.89
SMARCB1-204ENST00000407422 CEP135Q66GS9 1140 aa20.58■□□□□ 0.89
SMARCB1-204ENST00000407422 TRIM68Q6AZZ1 485 aa20.58■□□□□ 0.89
SMARCB1-204ENST00000407422 FAM83CQ9BQN1 747 aa20.58■□□□□ 0.89
SMARCB1-204ENST00000407422 SEMA4AQ9H3S1 761 aa20.58■□□□□ 0.89
SMARCB1-204ENST00000407422 PRMT8Q9NR22 394 aaPredicted RBP20.58■□□□□ 0.89
SMARCB1-204ENST00000407422 TMEM30AQ9NV96 361 aa20.58■□□□□ 0.89
SMARCB1-204ENST00000407422 OTOL1A6NHN0 477 aaPredicted RBP20.57■□□□□ 0.88
SMARCB1-204ENST00000407422 SOBPA7XYQ1 873 aa20.57■□□□□ 0.88
SMARCB1-204ENST00000407422 A8MXQ7 604 aa20.57■□□□□ 0.88
SMARCB1-204ENST00000407422 FAM163BP0C2L3 166 aa20.57■□□□□ 0.88
SMARCB1-204ENST00000407422 RAP1GAPP47736 663 aa20.57■□□□□ 0.88
SMARCB1-204ENST00000407422 CACNA2D1P54289 1103 aa20.57■□□□□ 0.88
SMARCB1-204ENST00000407422 GAS6Q14393 721 aa20.57■□□□□ 0.88
SMARCB1-204ENST00000407422 ZNF699Q32M78 642 aa20.57■□□□□ 0.88
SMARCB1-204ENST00000407422 RALGPS2Q86X27 583 aaPredicted RBP20.57■□□□□ 0.88
SMARCB1-204ENST00000407422 MSANTD3Q96H12 275 aa20.57■□□□□ 0.88
SMARCB1-204ENST00000407422 SPATA17Q96L03 361 aa20.57■□□□□ 0.88
SMARCB1-204ENST00000407422 VRTNQ9H8Y1 702 aa20.57■□□□□ 0.88
SMARCB1-204ENST00000407422 HPS4Q9NQG7 708 aa20.57■□□□□ 0.88
SMARCB1-204ENST00000407422 ATG2BQ96BY7 2078 aa20.57■□□□□ 0.88
SMARCB1-204ENST00000407422 C2orf78A6NCI8 922 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 F8VP50 259 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 CLDN5O00501 218 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 CLSTN1O94985 981 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 AP3M2P53677 418 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 PON2Q15165 354 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 ITPRIPL2Q3MIP1 535 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 SCARA5Q6ZMJ2 495 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 ZNF518BQ9C0D4 1074 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 EBF3Q9H4W6 596 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 TRAF3IP3Q9Y228 551 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 CALUO43852 315 aaPredicted RBP20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 ZNF268Q14587 947 aaPredicted RBP20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 ZNF667Q5HYK9 610 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 C1orf220Q5T0J3 134 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 C1orf228Q6PIY5 440 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 DENND5BQ6ZUT9 1274 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 B3GALNT2Q8NCR0 500 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 TTC16Q8NEE8 873 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 NELL1Q92832 810 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 CCDC47Q96A33 483 aaKnown RBP20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 B3GNT5Q9BYG0 378 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 SDCBP2Q9H190 292 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 KIF9Q9HAQ2 790 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 GCNT4Q9P109 453 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 FRMD4BQ9Y2L6 1034 aa20.56■□□□□ 0.88
SMARCB1-204ENST00000407422 HELZP42694 1942 aaKnown RBP20.55■□□□□ 0.88
SMARCB1-204ENST00000407422 CKMP06732 381 aa20.55■□□□□ 0.88
SMARCB1-204ENST00000407422 ANXA13P27216 316 aa20.55■□□□□ 0.88
SMARCB1-204ENST00000407422 ZACNQ401N2 412 aa20.55■□□□□ 0.88
SMARCB1-204ENST00000407422 Q6ZS52 159 aa20.55■□□□□ 0.88
SMARCB1-204ENST00000407422 ARL14EPQ8N8R7 260 aaPredicted RBP20.55■□□□□ 0.88
SMARCB1-204ENST00000407422 ZBTB44Q8NCP5 570 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms