RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 INVSQ9Y283 1065 aa13.19□□□□□ -0.3
APOBEC3B-204ENST00000407298 WNT6Q9Y6F9 365 aa13.19□□□□□ -0.3
APOBEC3B-204ENST00000407298 STYXL1Q9Y6J8 313 aa13.19□□□□□ -0.3
APOBEC3B-204ENST00000407298 ABCA7Q8IZY2 2146 aa13.19□□□□□ -0.3
APOBEC3B-204ENST00000407298 MYMKA6NI61 221 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 ANKRD63C9JTQ0 380 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 CDX4O14627 284 aaPredicted RBP13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 MAP3K13O43283 966 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 HDCP19113 662 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 CYP2F1P24903 491 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 IRX4P78413 519 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 CFAP221Q4G0U5 840 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 C2orf27AQ580R0 203 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 INTS6LQ5JSJ4 861 aaKnown RBP13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 ANO7Q6IWH7 933 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 PDCL2Q8N4E4 241 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 KRI1Q8N9T8 703 aaKnown RBP13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 RIN3Q8TB24 985 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 SH3RF2Q8TEC5 729 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 PIGKQ92643 395 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 HVCN1Q96D96 273 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 CYP2S1Q96SQ9 504 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 TPSD1Q9BZJ3 242 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 DDX43Q9NXZ2 648 aaKnown RBP13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 MMP17Q9ULZ9 603 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 ARHGAP26Q9UNA1 814 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 AGAP1Q9UPQ3 857 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 R3HCC1Q9Y3T6 440 aaKnown RBP13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 ANK1P16157 1881 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 NUP205Q92621 2012 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 TSC2P49815 1807 aa13.18□□□□□ -0.3
APOBEC3B-204ENST00000407298 AKAP13Q12802 2813 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 TCHHQ07283 1943 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 PKD1L2Q7Z442 2459 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 SPEGQ15772 3267 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 TULP1O00294 542 aaPredicted RBP13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 SLC9A3R1O14745 358 aaPredicted RBP13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 TNFRSF10BO14763 440 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 TADA3O75528 432 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 BMP15O95972 392 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 LDHAP00338 332 aaKnown RBP13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 MAGEA11P43364 429 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 GPR15P49685 360 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 TFAMQ00059 246 aaKnown RBP13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 ACAP1Q15027 740 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 CRY1Q16526 586 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 TRIM61Q5EBN2 209 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 SDHAF4Q5VUM1 108 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 NAIF1Q69YI7 327 aaPredicted RBP13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 C4orf50Q6ZRC1 276 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 SYT12Q8IV01 421 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 SCN4BQ8IWT1 228 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 LRRC52Q8N7C0 313 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 ARL14EPQ8N8R7 260 aaPredicted RBP13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 WHAMMQ8TF30 809 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 EZH1Q92800 747 aaPredicted RBP13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 GATA6Q92908 595 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 POLMQ9NP87 494 aaPredicted RBP13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 GDAP2Q9NXN4 497 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 GTF3C4Q9UKN8 822 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 EXOC7Q9UPT5 735 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 SMC3Q9UQE7 1217 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 NEUROG3Q9Y4Z2 214 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 THADAQ6YHU6 1953 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 FASNP49327 2511 aaKnown RBP13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 DMXL2Q8TDJ6 3036 aa13.17□□□□□ -0.3
APOBEC3B-204ENST00000407298 ASPMQ8IZT6 3477 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 SRRM3A6NNA2 597 aaPredicted RBP13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 UPK3BL1B0FP48 263 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 UPK3BL2E5RIL1 263 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 H0Y626 953 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 H3BQV1 296 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 K7EQS6 105 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 TRIM16O95361 564 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 SPINK2P20155 84 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 POLR2BP30876 1174 aaKnown RBP13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 HOXD12P35452 270 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 PPP3CCP48454 512 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 ATXN3P54252 364 aaPredicted RBP13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 SEC13P55735 322 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 RBP5P82980 135 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 MCM6Q14566 821 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 MAPRE1Q15691 268 aaKnown RBP13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 PREPLQ4J6C6 727 aaPredicted RBP13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 ZNF720Q7Z2F6 126 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 TTC30AQ86WT1 665 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 TOP6BLQ8N6T0 577 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 DEFB124Q8NES8 71 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 MDGA1Q8NFP4 955 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 CEP76Q8TAP6 659 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 ZCCHC14Q8WYQ9 949 aaKnown RBP13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 RAD54LQ92698 747 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 SPATA17Q96L03 361 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 SLC22A12Q96S37 553 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 FIZ1Q96SL8 496 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 TMEM121BQ9BXQ6 578 aaPredicted RBP13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 LINC00597Q9H2U6 94 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 TRPM5Q9NZQ8 1165 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 GCNT4Q9P109 453 aa13.16□□□□□ -0.3
APOBEC3B-204ENST00000407298 ITGA11Q9UKX5 1188 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms