RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 CCSER1Q9C0I3 900 aa12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 MMP17Q9ULZ9 603 aa12.83□□□□□ -0.36
SPTLC1P3-201ENST00000403408 SGK1O00141 431 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ADAM23O75077 832 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 PRPF40AO75400 957 aaKnown RBP12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 PLA2G4BP0C869 781 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ITPKAP23677 461 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ACAT1P24752 427 aaKnown RBP12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 IFNAR2P48551 515 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 TRAPPC10P48553 1259 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 LIG4P49917 911 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ANAPC15P60006 121 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 AMPD2Q01433 879 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 TMEM132DQ14C87 1099 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 TMEM119Q4V9L6 283 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 CRELD2Q6UXH1 353 aaPredicted RBP12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 C12orf40Q86WS4 652 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 PROSER1Q86XN7 944 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 CCDC83Q8IWF9 413 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ZSWIM2Q8NEG5 633 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 CXorf38Q8TB03 319 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 SH3RF2Q8TEC5 729 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 C2orf15Q8WU43 125 aaKnown RBP12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 BICD1Q96G01 975 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 MYRFLQ96LU7 910 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 MSTO1Q9BUK6 570 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 TRPC7Q9HCX4 862 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ZMYM5Q9UJ78 669 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 HCN2Q9UL51 889 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 PCDHB5Q9Y5E4 795 aa12.82□□□□□ -0.36
SPTLC1P3-201ENST00000403408 UPK3BL1B0FP48 263 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 UPK3BL2E5RIL1 263 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 TNFRSF10BO14763 440 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 SCAMP3O14828 347 aaKnown RBP12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 HNRNPDLO14979 420 aaKnown RBP12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 XPOTO43592 962 aaKnown RBP12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 CSH1P0DML2 217 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 CSH2P0DML3 217 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 CD59P13987 128 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 TAF6P49848 677 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 SMTNP53814 917 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 PEAR1Q5VY43 1037 aaPredicted RBP12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 RAB44Q7Z6P3 723 aaPredicted RBP12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 TTC30AQ86WT1 665 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 PDCL2Q8N4E4 241 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 DEFB119Q8N690 84 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ALLCQ8N6M5 410 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 IL17RCQ8NAC3 791 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ATP2A3Q93084 1043 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 TRMT2BQ96GJ1 504 aaKnown RBP12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 CAMK1GQ96NX5 476 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 TSPAN18Q96SJ8 248 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 REEP2Q9BRK0 252 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 DPP3Q9NY33 737 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 PILRBQ9UKJ0 227 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 DSEQ9UL01 958 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 L1RE1Q9UN81 338 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 KNTC1P50748 2209 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ZNF462Q96JM2 2506 aa12.81□□□□□ -0.36
SPTLC1P3-201ENST00000403408 MGAQ8IWI9 3026 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 PTPRBP23467 1997 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 KLF8O95600 359 aaPredicted RBP12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 CYP17A1P05093 508 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 TCF3P15923 654 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 KIR2DL1P43626 348 aaPredicted RBP12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 NEK4P51957 841 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ZNF131P52739 623 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 USP46P62068 366 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 SCAPQ12770 1279 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 SLC23A3Q6PIS1 610 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 C11orf74Q86VG3 221 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 METTL23Q86XA0 190 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 SYT12Q8IV01 421 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 CD302Q8IX05 232 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 THEM5Q8N1Q8 247 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 TXNDC5Q8NBS9 432 aaKnown RBP12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 TMEM206Q9H813 350 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 CAPN10Q9HC96 672 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 GTF3C4Q9UKN8 822 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 DERAQ9Y315 318 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 C2CD2Q9Y426 696 aa12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.8□□□□□ -0.36
SPTLC1P3-201ENST00000403408 TRAV19A0A0A6YYK7 116 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 KPNA7A9QM74 516 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 CKMP06732 381 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 USP17L7P0C7H9 530 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 PAX3P23760 479 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 ADSSP30520 456 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 TIE1P35590 1138 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 PRPHP41219 470 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 SMARCB1Q12824 385 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 LMAN2Q12907 356 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 KYAT1Q16773 422 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 COL28A1Q2UY09 1125 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 DTHD1Q6ZMT9 781 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 LPCAT2Q7L5N7 544 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 PDZD3Q86UT5 571 aa12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 DCP1BQ8IZD4 617 aaKnown RBP12.79□□□□□ -0.36
SPTLC1P3-201ENST00000403408 PHTF2Q8N3S3 785 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms