RNA–Protein interactions for RNA: ENST00000398488.5

MBD1-207, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 1,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-207ENST00000398488 COL25A1Q9BXS0 654 aaPredicted RBP16.76■□□□□ 0.27
MBD1-207ENST00000398488 FAM50BQ9Y247 325 aa16.76■□□□□ 0.27
MBD1-207ENST00000398488 DOCK8Q8NF50 2099 aa16.76■□□□□ 0.27
MBD1-207ENST00000398488 SLC38A8A6NNN8 435 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 MYL4P12829 197 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 TBXAS1P24557 533 aaPredicted RBP16.75■□□□□ 0.27
MBD1-207ENST00000398488 GRIK1P39086 918 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 GCNT1Q02742 428 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 TMEM270Q6UE05 265 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 GAREM2Q75VX8 874 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 TMEM150AQ86TG1 271 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 SHKBP1Q8TBC3 707 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 FAM200AQ8TCP9 573 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 TFAP2BQ92481 460 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 CYFIP2Q96F07 1278 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 HEXIM2Q96MH2 286 aaKnown RBP16.75■□□□□ 0.27
MBD1-207ENST00000398488 UHRF1Q96T88 793 aaPredicted RBP16.75■□□□□ 0.27
MBD1-207ENST00000398488 MED10Q9BTT4 135 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 ACP6Q9NPH0 428 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 PRKAG3Q9UGI9 489 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 PCDHB4Q9Y5E5 795 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 SMTNL1A8MU46 457 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 BECN2A8MW95 431 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 EPHB6O15197 1021 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 TEX33O43247 280 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 PNMA6AP0CW24 399 aaPredicted RBP16.75■□□□□ 0.27
MBD1-207ENST00000398488 CDK11BP21127 795 aaKnown RBP16.75■□□□□ 0.27
MBD1-207ENST00000398488 ZNF132P52740 706 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 PLD1Q13393 1074 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 STXBP5Q5T5C0 1151 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 IQCEQ6IPM2 695 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 VSTM1Q6UX27 236 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 FGF13Q92913 245 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 ZSWIM3Q96MP5 696 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 HNRNPABQ99729 332 aaKnown RBP16.75■□□□□ 0.27
MBD1-207ENST00000398488 LSM14BQ9BX40 385 aaKnown RBP16.75■□□□□ 0.27
MBD1-207ENST00000398488 AVENQ9NQS1 362 aaPredicted RBP16.75■□□□□ 0.27
MBD1-207ENST00000398488 KRT82Q9NSB4 513 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 APEX2Q9UBZ4 518 aa16.75■□□□□ 0.27
MBD1-207ENST00000398488 GREB1Q4ZG55 1949 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 LGALS16A8MUM7 142 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 TADA3O75528 432 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 AP1G2O75843 785 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 NOL4O94818 638 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 GBP2P32456 591 aaPredicted RBP16.74■□□□□ 0.27
MBD1-207ENST00000398488 SSTR3P32745 418 aaPredicted RBP16.74■□□□□ 0.27
MBD1-207ENST00000398488 RPL10AP62906 217 aaKnown RBP16.74■□□□□ 0.27
MBD1-207ENST00000398488 ARHGAP44Q17R89 818 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 KLHDC7AQ5VTJ3 777 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 LRSAM1Q6UWE0 723 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 NPAS3Q8IXF0 933 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 GJD3Q8N144 294 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 ELMOD1Q8N336 334 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 RBBP8NLQ8NC74 664 aaPredicted RBP16.74■□□□□ 0.27
MBD1-207ENST00000398488 MCRS1Q96EZ8 462 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 C8orf48Q96LL4 319 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 NAP1L5Q96NT1 182 aaPredicted RBP16.74■□□□□ 0.27
MBD1-207ENST00000398488 GPR88Q9GZN0 384 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 ASAH2Q9NR71 780 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 DNAJC12Q9UKB3 198 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 MAGED2Q9UNF1 606 aaPredicted RBP16.74■□□□□ 0.27
MBD1-207ENST00000398488 CNTN6Q9UQ52 1028 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 SIK3Q9Y2K2 1263 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 MRPS23Q9Y3D9 190 aaKnown RBP16.74■□□□□ 0.27
MBD1-207ENST00000398488 ASB3Q9Y575 518 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 FHOD1Q9Y613 1164 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 TTC28Q96AY4 2481 aa16.74■□□□□ 0.27
MBD1-207ENST00000398488 MUC3AQ02505 3323 aa16.73■□□□□ 0.27
MBD1-207ENST00000398488 A0A1W2PRU2 124 aa16.73■□□□□ 0.27
MBD1-207ENST00000398488 HHLA1C9JL84 531 aa16.73■□□□□ 0.27
MBD1-207ENST00000398488 F11P03951 625 aa16.73■□□□□ 0.27
MBD1-207ENST00000398488 MAP3K7CLP57077 242 aa16.73■□□□□ 0.27
MBD1-207ENST00000398488 TEAD2Q15562 447 aa16.73■□□□□ 0.27
MBD1-207ENST00000398488 CLEC20AQ6ZU45 233 aa16.73■□□□□ 0.27
MBD1-207ENST00000398488 PDZD4Q76G19 769 aaPredicted RBP16.73■□□□□ 0.27
MBD1-207ENST00000398488 GPRIN1Q7Z2K8 1008 aa16.73■□□□□ 0.27
MBD1-207ENST00000398488 SPATA17Q96L03 361 aa16.73■□□□□ 0.27
MBD1-207ENST00000398488 NAA15Q9BXJ9 866 aaKnown RBP16.73■□□□□ 0.27
MBD1-207ENST00000398488 GANQ9H2C0 597 aa16.73■□□□□ 0.27
MBD1-207ENST00000398488 CSNK1G1Q9HCP0 422 aa16.73■□□□□ 0.27
MBD1-207ENST00000398488 LIMD1Q9UGP4 676 aa16.73■□□□□ 0.27
MBD1-207ENST00000398488 TULP2O00295 520 aa16.72■□□□□ 0.27
MBD1-207ENST00000398488 TNFRSF10BO14763 440 aa16.72■□□□□ 0.27
MBD1-207ENST00000398488 ASGR2P07307 311 aa16.72■□□□□ 0.27
MBD1-207ENST00000398488 LAMP2P13473 410 aa16.72■□□□□ 0.27
MBD1-207ENST00000398488 BRD2P25440 801 aaKnown RBP16.72■□□□□ 0.27
MBD1-207ENST00000398488 GABRR2P28476 465 aa16.72■□□□□ 0.27
MBD1-207ENST00000398488 CYP4F8P98187 520 aa16.72■□□□□ 0.27
MBD1-207ENST00000398488 VEPH1Q14D04 833 aa16.72■□□□□ 0.27
MBD1-207ENST00000398488 ARHGAP17Q68EM7 881 aa16.72■□□□□ 0.27
MBD1-207ENST00000398488 TTC30AQ86WT1 665 aa16.72■□□□□ 0.27
MBD1-207ENST00000398488 GPIHBP1Q8IV16 184 aa16.72■□□□□ 0.27
MBD1-207ENST00000398488 TTC39CQ8N584 583 aa16.72■□□□□ 0.27
MBD1-207ENST00000398488 TDRD5Q8NAT2 981 aaKnown RBP16.72■□□□□ 0.27
MBD1-207ENST00000398488 SCAMP5Q8TAC9 235 aa16.72■□□□□ 0.27
MBD1-207ENST00000398488 RSAD2Q8WXG1 361 aa16.72■□□□□ 0.27
MBD1-207ENST00000398488 SMARCD1Q96GM5 515 aa16.72■□□□□ 0.27
MBD1-207ENST00000398488 RPP25Q9BUL9 199 aaKnown RBP16.72■□□□□ 0.27
MBD1-207ENST00000398488 FAM124BQ9H5Z6 455 aaPredicted RBP16.72■□□□□ 0.27
MBD1-207ENST00000398488 CDH7Q9ULB5 785 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms