RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 CBX6O95503 412 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 APOC2P02655 101 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 TGFB2P61812 414 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 ZNF200P98182 395 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 OCRLQ01968 901 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 EN1Q05925 392 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 TFDP2Q14188 446 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 DBN1Q16643 649 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 DUOXA2Q1HG44 320 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 TRIM68Q6AZZ1 485 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 CAPN12Q6ZSI9 719 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 ACTL9Q8TC94 416 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 KCNV2Q8TDN2 545 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 DCAKDQ8WVC6 231 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 DENND2DQ9H6A0 471 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 DHX33Q9H6R0 707 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 PNPLA8Q9NP80 782 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 ZNF302Q9NR11 478 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 NRBP2Q9NSY0 501 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 HEY2Q9UBP5 337 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 NKX1-2Q9UD57 310 aaPredicted RBP10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 XPO7Q9UIA9 1087 aaKnown RBP10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 ANGPTL2Q9UKU9 493 aa10.52□□□□□ -0.73
UBE2D3-208ENST00000394803 ADGRA2Q96PE1 1338 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 MYH9P35579 1960 aaKnown RBP10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 CFAP69A5D8W1 941 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 SPATA31C2B4DYI2 1134 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 VWA5AO00534 786 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 CST8O60676 142 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 KRT37O76014 449 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 DHRS4L1P0CG22 281 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 KRT3P12035 628 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 ETS1P14921 441 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 DESP17661 470 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 ARL2P36404 184 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 SLC18A2Q05940 514 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 SLC34A1Q06495 639 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 ZNF252P-AS1Q0IIN9 211 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 PTK7Q13308 1070 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 MAPK6Q16659 721 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 CTC1Q2NKJ3 1217 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 BBS9Q3SYG4 887 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 ATP13A4Q4VNC1 1196 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 TTC39BQ5VTQ0 682 aaPredicted RBP10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 GPAT2Q6NUI2 795 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 CCDC60Q8IWA6 550 aaPredicted RBP10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 GLIS1Q8NBF1 620 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 MZB1Q8WU39 189 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 SLC44A1Q8WWI5 657 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 MTBPQ96DY7 904 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 PTCD3Q96EY7 689 aaKnown RBP10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 SIKE1Q9BRV8 207 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 RPAP3Q9H6T3 665 aaPredicted RBP10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 CISHQ9NSE2 258 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 KCNK4Q9NYG8 393 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 SCOCQ9UIL1 159 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 ZNF180Q9UJW8 692 aa10.51□□□□□ -0.73
UBE2D3-208ENST00000394803 A0A0G2JND7 137 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 F8W8V4 182 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 TRDMT1O14717 391 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 CHADO15335 359 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 AHCYL1O43865 530 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 GAS2O43903 313 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 CIB2O75838 187 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 TNNC2P02585 160 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 CFHP08603 1231 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 KDELR1P24390 212 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 RPL22P35268 128 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 SOX10P56693 466 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 EIF3EP60228 445 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 MXRA7P84157 204 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 PRKD1Q15139 912 aaPredicted RBP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 GSTA3Q16772 222 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 DNAL1Q4LDG9 190 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 RFX6Q8HWS3 928 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 SMC1BQ8NDV3 1235 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 CCDC110Q8TBZ0 833 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 SKA1Q96BD8 255 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 ELMO3Q96BJ8 720 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 HAUS1Q96CS2 278 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 MRRFQ96E11 262 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 SH3GL3Q99963 347 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 CCDC28BQ9BUN5 200 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 MRPL4Q9BYD3 311 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 NIFKQ9BYG3 293 aaKnown RBP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 WWP1Q9H0M0 922 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 ASNSD1Q9NWL6 643 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 DCTN4Q9UJW0 460 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 MAFBQ9Y5Q3 323 aaPredicted RBP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 PTPRJQ12913 1337 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 KIAA1217Q5T5P2 1943 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 C3orf70A6NLC5 250 aaPredicted RBP10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 COPEO14579 308 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 GSC2O15499 205 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 MAGEC1O60732 1142 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 TOM1L1O75674 476 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 SSTR1P30872 391 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 NEK3P51956 506 aa10.5□□□□□ -0.73
UBE2D3-208ENST00000394803 ROR1Q01973 937 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms