RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 PPP1R15BQ5SWA1 713 aa15.02□□□□□ -0.01
CLCN4-201ENST00000380829 NOTUMQ6P988 496 aa15.02□□□□□ -0.01
CLCN4-201ENST00000380829 ZDHHC24Q6UX98 284 aa15.02□□□□□ -0.01
CLCN4-201ENST00000380829 CPLX4Q7Z7G2 160 aa15.02□□□□□ -0.01
CLCN4-201ENST00000380829 KATNAL2Q8IYT4 538 aa15.02□□□□□ -0.01
CLCN4-201ENST00000380829 C3orf20Q8ND61 904 aa15.02□□□□□ -0.01
CLCN4-201ENST00000380829 ACSF2Q96CM8 615 aaPredicted RBP15.02□□□□□ -0.01
CLCN4-201ENST00000380829 LHX5Q9H2C1 402 aa15.02□□□□□ -0.01
CLCN4-201ENST00000380829 LRRC4CQ9HCJ2 640 aa15.02□□□□□ -0.01
CLCN4-201ENST00000380829 TUBGCP4Q9UGJ1 667 aa15.02□□□□□ -0.01
CLCN4-201ENST00000380829 GJD2Q9UKL4 321 aa15.02□□□□□ -0.01
CLCN4-201ENST00000380829 ATP8A1Q9Y2Q0 1164 aa15.02□□□□□ -0.01
CLCN4-201ENST00000380829 ANKRD33BA6NCL7 494 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 M0QYV0 167 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 MICAL2O94851 1124 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 ECEL1O95672 775 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 CPT1AP50416 773 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 NDST1P52848 882 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 GKAP1Q5VSY0 366 aaPredicted RBP15.01□□□□□ -0.01
CLCN4-201ENST00000380829 TXNRD3NBQ6F5E7 133 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 TBC1D1Q86TI0 1168 aaPredicted RBP15.01□□□□□ -0.01
CLCN4-201ENST00000380829 ARFGAP2Q8N6H7 521 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 C18orf25Q96B23 403 aaPredicted RBP15.01□□□□□ -0.01
CLCN4-201ENST00000380829 APBA2Q99767 749 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 AP5M1Q9H0R1 490 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 SYNCQ9H7C4 482 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 CYP3A43Q9HB55 503 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 C5orf60A6NFR6 353 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 SRRM3A6NNA2 597 aaPredicted RBP15.01□□□□□ -0.01
CLCN4-201ENST00000380829 SMNDC1O75940 238 aaKnown RBP eCLIP15.01□□□□□ -0.01
CLCN4-201ENST00000380829 ERBB2P04626 1255 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 AKAP5P24588 427 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 CTGFP29279 349 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 PSMC1P62191 440 aaKnown RBP15.01□□□□□ -0.01
CLCN4-201ENST00000380829 ADAM17P78536 824 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 ZNF844Q08AG5 666 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 CRHR2Q13324 411 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 JOSD2Q8TAC2 188 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 AGAP11Q8TF27 550 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 SNX27Q96L92 541 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 OSBPL8Q9BZF1 889 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 PIN4Q9Y237 131 aaKnown RBP15.01□□□□□ -0.01
CLCN4-201ENST00000380829 TRPM7Q96QT4 1865 aa15.01□□□□□ -0.01
CLCN4-201ENST00000380829 TRIP12Q14669 1992 aaPredicted RBP15□□□□□ -0.01
CLCN4-201ENST00000380829 HAS3O00219 553 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 RFC1P35251 1148 aaPredicted RBP15□□□□□ -0.01
CLCN4-201ENST00000380829 DRG2P55039 364 aaKnown RBP15□□□□□ -0.01
CLCN4-201ENST00000380829 KRT17Q04695 432 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 KLF1Q13351 362 aaPredicted RBP15□□□□□ -0.01
CLCN4-201ENST00000380829 EXD1Q8NHP7 514 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 UBA3Q8TBC4 463 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 DCLK3Q9C098 648 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 STRIP2Q9ULQ0 834 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 BARX2Q9UMQ3 279 aaPredicted RBP15□□□□□ -0.01
CLCN4-201ENST00000380829 NOVA2Q9UNW9 492 aaKnown RBP15□□□□□ -0.01
CLCN4-201ENST00000380829 PASKQ96RG2 1323 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 H0YGN5 161 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 PIK3R2O00459 728 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 DIAPH2O60879 1101 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 RECQL4O94761 1208 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 KRT3P12035 628 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 KRT10P13645 584 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 YARSP54577 528 aaKnown RBP15□□□□□ -0.01
CLCN4-201ENST00000380829 PPP2R2AP63151 447 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 CDC42EP1Q00587 391 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 SNX17Q15036 470 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 TRIP13Q15645 432 aaPredicted RBP15□□□□□ -0.01
CLCN4-201ENST00000380829 FSCN1Q16658 493 aaKnown RBP15□□□□□ -0.01
CLCN4-201ENST00000380829 KAZNQ674X7 775 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 NT5DC4Q86YG4 428 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 EMC1Q8N766 993 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 C12orf29Q8N999 325 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 CCDC63Q8NA47 563 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 MDM1Q8TC05 714 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 RUNDC3BQ96NL0 473 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 ZFYVE28Q9HCC9 887 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 BATF3Q9NR55 127 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 KLK14Q9P0G3 267 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 SNX9Q9Y5X1 595 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 NFS1Q9Y697 457 aa15□□□□□ -0.01
CLCN4-201ENST00000380829 MYADML2A6NDP7 307 aa14.99□□□□□ -0.01
CLCN4-201ENST00000380829 SNUPNO95149 360 aaKnown RBP14.99□□□□□ -0.01
CLCN4-201ENST00000380829 KRT1P04264 644 aa14.99□□□□□ -0.01
CLCN4-201ENST00000380829 SLC10A3P09131 477 aa14.99□□□□□ -0.01
CLCN4-201ENST00000380829 ATF7P17544 494 aaPredicted RBP14.99□□□□□ -0.01
CLCN4-201ENST00000380829 CYP3A5P20815 502 aa14.99□□□□□ -0.01
CLCN4-201ENST00000380829 INCA1Q0VD86 236 aa14.99□□□□□ -0.01
CLCN4-201ENST00000380829 NFX1Q12986 1120 aaKnown RBP14.99□□□□□ -0.01
CLCN4-201ENST00000380829 IRF5Q13568 498 aa14.99□□□□□ -0.01
CLCN4-201ENST00000380829 XYLT1Q86Y38 959 aa14.99□□□□□ -0.01
CLCN4-201ENST00000380829 MAIP1Q8WWC4 291 aa14.99□□□□□ -0.01
CLCN4-201ENST00000380829 KDM4CQ9H3R0 1056 aa14.99□□□□□ -0.01
CLCN4-201ENST00000380829 PLEKHA5Q9HAU0 1116 aa14.99□□□□□ -0.01
CLCN4-201ENST00000380829 METTL5Q9NRN9 209 aaKnown RBP14.99□□□□□ -0.01
CLCN4-201ENST00000380829 SCN1AP35498 2009 aa14.99□□□□□ -0.01
CLCN4-201ENST00000380829 PPFIA2O75334 1257 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 VDRP11473 427 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 DRD4P21917 467 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 PSMA2P25787 234 aa14.98□□□□□ -0.01
CLCN4-201ENST00000380829 TAP1Q03518 808 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms