RNA–Protein interactions for RNA: ENST00000380746.8

DNMT3A-203, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-203ENST00000380746 PTPN11Q06124 597 aaPredicted RBP11.48□□□□□ -0.57
DNMT3A-203ENST00000380746 SIX1Q15475 284 aaPredicted RBP11.48□□□□□ -0.57
DNMT3A-203ENST00000380746 CYB5D1Q6P9G0 228 aa11.48□□□□□ -0.57
DNMT3A-203ENST00000380746 ZNF354CQ86Y25 554 aa11.48□□□□□ -0.57
DNMT3A-203ENST00000380746 EXD1Q8NHP7 514 aa11.48□□□□□ -0.57
DNMT3A-203ENST00000380746 SLC16A10Q8TF71 515 aa11.48□□□□□ -0.57
DNMT3A-203ENST00000380746 RNF34Q969K3 372 aa11.48□□□□□ -0.57
DNMT3A-203ENST00000380746 ST6GALNAC4Q9H4F1 302 aa11.48□□□□□ -0.57
DNMT3A-203ENST00000380746 SMARCAD1Q9H4L7 1026 aa11.48□□□□□ -0.57
DNMT3A-203ENST00000380746 MAP3K20Q9NYL2 800 aaKnown RBP11.48□□□□□ -0.57
DNMT3A-203ENST00000380746 WHRNQ9P202 907 aa11.48□□□□□ -0.57
DNMT3A-203ENST00000380746 TCRBV7S3A2A0A539 114 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 MED7O43513 233 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 FAM155BO75949 473 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 MICAL2O94851 1124 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 ATP2A2P16615 1042 aaKnown RBP11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 ARL4CP56559 192 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 YWHAEP62258 255 aaKnown RBP11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 SNRPFP62306 86 aaKnown RBP11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 LMNB2Q03252 620 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 PARP9Q8IXQ6 854 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 FAM167AQ96KS9 214 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 FBXL18Q96ME1 805 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 IL1RAPL1Q9NZN1 696 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 TSPAN16Q9UKR8 245 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 USP18Q9UMW8 372 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 PIN4Q9Y237 131 aaKnown RBP11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 ANKRD31Q8N7Z5 1873 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 CFAP69A5D8W1 941 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 LIASO43766 372 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 STBD1O95210 358 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 ERBB2P04626 1255 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 P4HA1P13674 534 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 ARMCX2Q7L311 632 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 FAM131BQ86XD5 332 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 WDR49Q8IV35 697 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 C1orf127Q8N9H9 656 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 BBOF1Q8ND07 529 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 REPS2Q8NFH8 660 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 RILPQ96NA2 401 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 GPR20Q99678 358 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 UBN1Q9NPG3 1134 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 PGAP2Q9UHJ9 254 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 ARFGEF1Q9Y6D6 1849 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 TMEM191CA6NGB0 347 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 A6NJR5 290 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 CAPN9O14815 690 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 PSTPIP1O43586 416 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 MSCO60682 206 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 MAFO75444 373 aaPredicted RBP11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 ABCG1P45844 678 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 CCDC6Q16204 474 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 CCDC142Q17RM4 750 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 C9orf131Q5VYM1 1079 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 CES3Q6UWW8 571 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 ZNF677Q86XU0 584 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 SPATS2Q86XZ4 545 aaKnown RBP11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 C18orf25Q96B23 403 aaPredicted RBP11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 PGM2Q96G03 612 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 PPP1R36Q96LQ0 422 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 ERAP1Q9NZ08 941 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 HAO1Q9UJM8 370 aa11.47□□□□□ -0.57
DNMT3A-203ENST00000380746 FAM47DPA6NHR8 397 aa11.46□□□□□ -0.57
DNMT3A-203ENST00000380746 PPEF2O14830 753 aa11.46□□□□□ -0.57
DNMT3A-203ENST00000380746 ZC3H11AO75152 810 aaKnown RBP eCLIP11.46□□□□□ -0.57
DNMT3A-203ENST00000380746 NUDT17P0C025 328 aa11.46□□□□□ -0.57
DNMT3A-203ENST00000380746 ZBTB48P10074 688 aaPredicted RBP11.46□□□□□ -0.57
DNMT3A-203ENST00000380746 ADRA1DP25100 572 aa11.46□□□□□ -0.57
DNMT3A-203ENST00000380746 SDC4P31431 198 aa11.46□□□□□ -0.57
DNMT3A-203ENST00000380746 MMP13P45452 471 aa11.46□□□□□ -0.57
DNMT3A-203ENST00000380746 ROR1Q01973 937 aa11.46□□□□□ -0.57
DNMT3A-203ENST00000380746 C1QBPQ07021 282 aaKnown RBP11.46□□□□□ -0.57
DNMT3A-203ENST00000380746 PIGHQ14442 188 aaPredicted RBP11.46□□□□□ -0.57
DNMT3A-203ENST00000380746 HACE1Q8IYU2 909 aa11.46□□□□□ -0.57
DNMT3A-203ENST00000380746 SHCBP1LQ9BZQ2 653 aa11.46□□□□□ -0.57
DNMT3A-203ENST00000380746 DPP3Q9NY33 737 aa11.46□□□□□ -0.57
DNMT3A-203ENST00000380746 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 H3BRB1 525 aa11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 CYP1A1P04798 512 aaPredicted RBP11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 IQCF3P0C7M6 154 aa11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 ARF4P18085 180 aaPredicted RBP11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 PTK6Q13882 451 aa11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 SPARCL1Q14515 664 aa11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 CELF3Q5SZQ8 465 aaKnown RBP11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 MROH9Q5TGP6 573 aa11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 CROCCP2Q86T23 111 aa11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 DNERQ8NFT8 737 aa11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 TLCD1Q96CP7 247 aa11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 FAM111AQ96PZ2 611 aa11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 TUT1Q9H6E5 874 aaKnown RBP11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 AVENQ9NQS1 362 aaPredicted RBP11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 ACKR2O00590 384 aa11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 LRCH4O75427 683 aa11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 KRT7P08729 469 aa11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 CCDC130P13994 396 aa11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 ADORA2AP29274 412 aa11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 ALDH3A1P30838 453 aa11.46□□□□□ -0.58
DNMT3A-203ENST00000380746 ELK3P41970 407 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms