RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 MAP3K10Q02779 954 aa11.37□□□□□ -0.59
LINC00654-201ENST00000379053 SGCGQ13326 291 aa11.37□□□□□ -0.59
LINC00654-201ENST00000379053 PTGISQ16647 500 aa11.37□□□□□ -0.59
LINC00654-201ENST00000379053 C10orf53Q8N6V4 93 aa11.37□□□□□ -0.59
LINC00654-201ENST00000379053 DNERQ8NFT8 737 aa11.37□□□□□ -0.59
LINC00654-201ENST00000379053 CCDC3Q9BQI4 270 aa11.37□□□□□ -0.59
LINC00654-201ENST00000379053 NEU2Q9Y3R4 380 aa11.37□□□□□ -0.59
LINC00654-201ENST00000379053 CBX4O00257 560 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 NFIBO00712 420 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 DSG3P32926 999 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 MAPK9P45984 424 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 PPP2R2AP63151 447 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 MFSD10Q14728 455 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 MDH1BQ5I0G3 518 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 KHDRBS2Q5VWX1 349 aaKnown RBP11.36□□□□□ -0.59
LINC00654-201ENST00000379053 TRIM65Q6PJ69 517 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 FAM83AQ86UY5 434 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 CYFIP2Q96F07 1278 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 CAPNS2Q96L46 248 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 RUSC1Q9BVN2 902 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 ABHD16BQ9H3Z7 469 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 SRP72O76094 671 aaKnown RBP11.36□□□□□ -0.59
LINC00654-201ENST00000379053 INSRRP14616 1297 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 GRK3P35626 688 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 ZNF200P98182 395 aaPredicted RBP11.36□□□□□ -0.59
LINC00654-201ENST00000379053 LY6KQ17RY6 165 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 FAM171A1Q5VUB5 890 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 ZNF438Q7Z4V0 828 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 CNPY4Q8N129 248 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 VMP1Q96GC9 406 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 GOLPH3Q9H4A6 298 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 AGPAT3Q9NRZ7 376 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 FOXP2O15409 715 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 PHF2O75151 1096 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 VDRP11473 427 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 NCKAP1LP55160 1127 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 OVOS1Q6IE37 1185 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 MRNIPQ6NTE8 343 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 ST13P4Q8IZP2 240 aaPredicted RBP11.36□□□□□ -0.59
LINC00654-201ENST00000379053 ZNF556Q9HAH1 456 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 H2AFY2Q9P0M6 372 aaPredicted RBP11.36□□□□□ -0.59
LINC00654-201ENST00000379053 KIAA1257Q9ULG3 409 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 PCDHB5Q9Y5E4 795 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 PTPN7P35236 360 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 SLC9A5Q14940 896 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 CCDC85BQ15834 202 aaPredicted RBP11.36□□□□□ -0.59
LINC00654-201ENST00000379053 TAF2Q6P1X5 1199 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 SENP2Q9HC62 589 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 RIC8BQ9NVN3 520 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 LNPEPQ9UIQ6 1025 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 MYO1GB0I1T2 1018 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 CSDE1O75534 798 aaKnown RBP11.36□□□□□ -0.59
LINC00654-201ENST00000379053 SOAT2O75908 522 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 ITGALP20701 1170 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 BCAT1P54687 386 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 TERF2Q15554 542 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 SUGP1Q8IWZ8 645 aaKnown RBP11.36□□□□□ -0.59
LINC00654-201ENST00000379053 XPO6Q96QU8 1125 aaKnown RBP11.36□□□□□ -0.59
LINC00654-201ENST00000379053 CGRRF1Q99675 332 aa11.36□□□□□ -0.59
LINC00654-201ENST00000379053 TLR8Q9NR97 1041 aaKnown RBP11.36□□□□□ -0.59
LINC00654-201ENST00000379053 VWA5AO00534 786 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 ANTXR2P58335 489 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 OCA2Q04671 838 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 IKBKEQ14164 716 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 FSCN1Q16658 493 aaKnown RBP11.35□□□□□ -0.59
LINC00654-201ENST00000379053 PCNX4Q63HM2 1172 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 GMCL1Q96IK5 515 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 P2RX7Q99572 595 aaKnown RBP11.35□□□□□ -0.59
LINC00654-201ENST00000379053 ASCC2Q9H1I8 757 aaPredicted RBP11.35□□□□□ -0.59
LINC00654-201ENST00000379053 EHD4Q9H223 541 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 MED14O60244 1454 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 FBXO21O94952 628 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 ALDH18A1P54886 795 aaKnown RBP11.35□□□□□ -0.59
LINC00654-201ENST00000379053 TMED1Q13445 227 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 PKN2Q16513 984 aaKnown RBP11.35□□□□□ -0.59
LINC00654-201ENST00000379053 CLEC16AQ2KHT3 1053 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 KRT78Q8N1N4 520 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 FAM71DQ8N9W8 422 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 GMCL1P1Q8NEA9 526 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 ZMAT2Q96NC0 199 aaKnown RBP11.35□□□□□ -0.59
LINC00654-201ENST00000379053 NMRK1Q9NWW6 199 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 TIMM13Q9Y5L4 95 aaPredicted RBP11.35□□□□□ -0.59
LINC00654-201ENST00000379053 ANKRD65E5RJM6 399 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 SLC37A4O43826 429 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 FAM107AO95990 144 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 COMTP21964 271 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 NPTX2P47972 431 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 MTM1Q13496 603 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 C9orf72Q96LT7 481 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 CDK5RAP1Q96SZ6 601 aaKnown RBP11.35□□□□□ -0.59
LINC00654-201ENST00000379053 PDCD2LQ9BRP1 358 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 VTA1Q9NP79 307 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 SMPD4Q9NXE4 827 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 FAM47E-STBD1D6RA91 191 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 PJA2O43164 708 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 GUCA1CO95843 209 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 CDC16Q13042 620 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 STX3Q13277 289 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 INPP5AQ14642 412 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 TIGD7Q6NT04 549 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms