RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 FDXRP22570 491 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 SLC16A1P53985 500 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 SIM1P81133 766 aaPredicted RBP5.56□□□□□ -1.52
PMS1-202ENST00000374826 OCA2Q04671 838 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 ITKQ08881 620 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 LMOD3Q0VAK6 560 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 SLC15A2Q16348 729 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 SPDYE7PQ495Y7 208 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 ZNF790Q6PG37 636 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 MIGA2Q7L4E1 593 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 ZNF384Q8TF68 577 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 RNPEPQ9H4A4 650 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 KIAA1586Q9HCI6 787 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 SEMA4GQ9NTN9 838 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 TFCP2L1Q9NZI6 479 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 LAS1LQ9Y4W2 734 aaKnown RBP5.56□□□□□ -1.52
PMS1-202ENST00000374826 DDX60Q8IY21 1712 aaKnown RBP5.56□□□□□ -1.52
PMS1-202ENST00000374826 SBF1O95248 1867 aa5.56□□□□□ -1.52
PMS1-202ENST00000374826 SHTN1A0MZ66 631 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 KLHL33A6NCF5 533 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 MYADML2A6NDP7 307 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 XPOTO43592 962 aaKnown RBP5.55□□□□□ -1.52
PMS1-202ENST00000374826 PCDHGA12O60330 932 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 KATNA1O75449 491 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 RBMXL2O75526 392 aaKnown RBP5.55□□□□□ -1.52
PMS1-202ENST00000374826 PRSS23O95084 383 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 FGFR4P22455 802 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 TAF7Q15545 349 aaPredicted RBP5.55□□□□□ -1.52
PMS1-202ENST00000374826 ATP2B3Q16720 1220 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 B3GNTL1Q67FW5 361 aaPredicted RBP5.55□□□□□ -1.52
PMS1-202ENST00000374826 BHLHA9Q7RTU4 235 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 SRRM1Q8IYB3 904 aaKnown RBP5.55□□□□□ -1.52
PMS1-202ENST00000374826 PRPF38AQ8NAV1 312 aaKnown RBP5.55□□□□□ -1.52
PMS1-202ENST00000374826 ANKS1AQ92625 1134 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 FUBP1Q96AE4 644 aaKnown RBP5.55□□□□□ -1.52
PMS1-202ENST00000374826 ALOXE3Q9BYJ1 711 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 CCDC8Q9H0W5 538 aaPredicted RBP5.55□□□□□ -1.52
PMS1-202ENST00000374826 TSPYL4Q9UJ04 414 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 PCDHGA9Q9Y5G4 932 aaKnown RBP5.55□□□□□ -1.52
PMS1-202ENST00000374826 PCDHGA8Q9Y5G5 932 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 PCDHGA7Q9Y5G6 932 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 PCDHGA6Q9Y5G7 932 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 PCDHGA3Q9Y5H0 932 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 NOX1Q9Y5S8 564 aa5.55□□□□□ -1.52
PMS1-202ENST00000374826 TNRC6CQ9HCJ0 1690 aaKnown RBP5.54□□□□□ -1.52
PMS1-202ENST00000374826 TCRBV7S2A1N4TA0A589 114 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 FZD9O00144 591 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 GABRDO14764 452 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 KIAA0391O15091 583 aaKnown RBP5.54□□□□□ -1.52
PMS1-202ENST00000374826 C1QL1O75973 258 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 CKBP12277 381 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 CRKLP46109 303 aaKnown RBP5.54□□□□□ -1.52
PMS1-202ENST00000374826 PIP4K2AP48426 406 aaPredicted RBP5.54□□□□□ -1.52
PMS1-202ENST00000374826 KRTAP10-9P60411 292 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 CTXN1P60606 82 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 HSD11B2P80365 405 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 CREMQ03060 361 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 KRT24Q2M2I5 525 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 Q6ZNX1 250 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 MICALCLQ6ZW33 695 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 RSPH3Q86UC2 560 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 FITM2Q8N6M3 262 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 RAB24Q969Q5 203 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 HDAC10Q969S8 669 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 RNF31Q96EP0 1072 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 C11orf54Q9H0W9 315 aaPredicted RBP5.54□□□□□ -1.52
PMS1-202ENST00000374826 TDP1Q9NUW8 608 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 USP25Q9UHP3 1055 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 ZBTB1Q9Y2K1 713 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 PCDHA13Q9Y5I0 950 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 MRFAP1Q9Y605 127 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 DICER1Q9UPY3 1922 aaKnown RBP5.54□□□□□ -1.52
PMS1-202ENST00000374826 COL15A1P39059 1388 aa5.54□□□□□ -1.52
PMS1-202ENST00000374826 A0A1B0GUL6 1792 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 CCDC78A2IDD5 438 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 CDHR4A6H8M9 788 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 ALG1L2C9J202 215 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 GPANK1O95872 356 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 CYP19A1P11511 503 aaPredicted RBP5.53□□□□□ -1.52
PMS1-202ENST00000374826 CACNA2D1P54289 1103 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 KRT85P78386 507 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 CDC42EP1Q00587 391 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 TARDBPQ13148 414 aaKnown RBP eCLIP5.53□□□□□ -1.52
PMS1-202ENST00000374826 PCBP2Q15366 365 aaKnown RBP eCLIP5.53□□□□□ -1.52
PMS1-202ENST00000374826 DACT2Q5SW24 774 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 FOXR2Q6PJQ5 311 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 COL23A1Q86Y22 540 aaPredicted RBP5.53□□□□□ -1.52
PMS1-202ENST00000374826 DCBLD1Q8N8Z6 715 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 BOD1Q96IK1 185 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 TMX3Q96JJ7 454 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 TEKT5Q96M29 485 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 GSTO2Q9H4Y5 243 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 TMEM74BQ9NUR3 256 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 FOXJ2Q9P0K8 574 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 KCNE5Q9UJ90 142 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 SRCAPQ6ZRS2 3230 aa5.53□□□□□ -1.52
PMS1-202ENST00000374826 SOS1Q07889 1333 aaPredicted RBP5.52□□□□□ -1.53
PMS1-202ENST00000374826 LRRC3CA6NJW4 275 aa5.52□□□□□ -1.53
PMS1-202ENST00000374826 HTRA2O43464 458 aaPredicted RBP5.52□□□□□ -1.53
PMS1-202ENST00000374826 SGTAO43765 313 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms