RNA–Protein interactions for RNA: ENST00000374610.6

PFDN6-203, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-203ENST00000374610 SIX2Q9NPC8 291 aa16.16■□□□□ 0.18
PFDN6-203ENST00000374610 DMAP1Q9NPF5 467 aaPredicted RBP16.16■□□□□ 0.18
PFDN6-203ENST00000374610 NLRC4Q9NPP4 1024 aa16.16■□□□□ 0.18
PFDN6-203ENST00000374610 ASAH2Q9NR71 780 aa16.16■□□□□ 0.18
PFDN6-203ENST00000374610 EHD2Q9NZN4 543 aa16.16■□□□□ 0.18
PFDN6-203ENST00000374610 FHOD1Q9Y613 1164 aa16.16■□□□□ 0.18
PFDN6-203ENST00000374610 F8VP50 259 aa16.15■□□□□ 0.18
PFDN6-203ENST00000374610 CSH1P0DML2 217 aa16.15■□□□□ 0.18
PFDN6-203ENST00000374610 CSH2P0DML3 217 aa16.15■□□□□ 0.18
PFDN6-203ENST00000374610 MYL4P12829 197 aa16.15■□□□□ 0.18
PFDN6-203ENST00000374610 ACO1P21399 889 aaKnown RBP16.15■□□□□ 0.18
PFDN6-203ENST00000374610 GPR15P49685 360 aa16.15■□□□□ 0.18
PFDN6-203ENST00000374610 MAP3K7CLP57077 242 aa16.15■□□□□ 0.18
PFDN6-203ENST00000374610 BPIFB4P59827 614 aa16.15■□□□□ 0.18
PFDN6-203ENST00000374610 IFRD2Q12894 506 aaPredicted RBP16.15■□□□□ 0.18
PFDN6-203ENST00000374610 STILQ15468 1287 aa16.15■□□□□ 0.18
PFDN6-203ENST00000374610 PABPC1LQ4VXU2 614 aaKnown RBP16.15■□□□□ 0.18
PFDN6-203ENST00000374610 PPP1R26Q5T8A7 1209 aaPredicted RBP16.15■□□□□ 0.18
PFDN6-203ENST00000374610 SDHAF4Q5VUM1 108 aa16.15■□□□□ 0.18
PFDN6-203ENST00000374610 FUKQ8N0W3 1084 aa16.15■□□□□ 0.18
PFDN6-203ENST00000374610 STK33Q9BYT3 514 aa16.15■□□□□ 0.18
PFDN6-203ENST00000374610 PDCL3Q9H2J4 239 aa16.15■□□□□ 0.18
PFDN6-203ENST00000374610 SIK3Q9Y2K2 1263 aa16.15■□□□□ 0.18
PFDN6-203ENST00000374610 GRXCR2A6NFK2 248 aa16.14■□□□□ 0.17
PFDN6-203ENST00000374610 ZNF197O14709 1029 aa16.14■□□□□ 0.17
PFDN6-203ENST00000374610 THAP12O43422 761 aa16.14■□□□□ 0.17
PFDN6-203ENST00000374610 RHOP08100 348 aa16.14■□□□□ 0.17
PFDN6-203ENST00000374610 POU2F2P09086 479 aa16.14■□□□□ 0.17
PFDN6-203ENST00000374610 FSHRP23945 695 aa16.14■□□□□ 0.17
PFDN6-203ENST00000374610 GNA15P30679 374 aa16.14■□□□□ 0.17
PFDN6-203ENST00000374610 KCNQ1P51787 676 aa16.14■□□□□ 0.17
PFDN6-203ENST00000374610 NR1I3Q14994 352 aa16.14■□□□□ 0.17
PFDN6-203ENST00000374610 GOLGA7BQ2TAP0 167 aa16.14■□□□□ 0.17
PFDN6-203ENST00000374610 DNAJB7Q7Z6W7 309 aaPredicted RBP16.14■□□□□ 0.17
PFDN6-203ENST00000374610 UBR7Q8N806 425 aa16.14■□□□□ 0.17
PFDN6-203ENST00000374610 LEMD2Q8NC56 503 aa16.14■□□□□ 0.17
PFDN6-203ENST00000374610 PSMG2Q969U7 264 aa16.14■□□□□ 0.17
PFDN6-203ENST00000374610 ZNF707Q96C28 371 aaPredicted RBP16.14■□□□□ 0.17
PFDN6-203ENST00000374610 ASB2Q96Q27 587 aa16.14■□□□□ 0.17
PFDN6-203ENST00000374610 HCFC1R1Q9NWW0 138 aa16.14■□□□□ 0.17
PFDN6-203ENST00000374610 CEP72Q9P209 647 aa16.14■□□□□ 0.17
PFDN6-203ENST00000374610 DNMT3BQ9UBC3 853 aaKnown RBP16.14■□□□□ 0.17
PFDN6-203ENST00000374610 UXTQ9UBK9 157 aaPredicted RBP16.14■□□□□ 0.17
PFDN6-203ENST00000374610 MRPS23Q9Y3D9 190 aaKnown RBP16.14■□□□□ 0.17
PFDN6-203ENST00000374610 A0A1W2PQC6 194 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 SLC38A8A6NNN8 435 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 RNF225M0QZC1 329 aaPredicted RBP16.13■□□□□ 0.17
PFDN6-203ENST00000374610 FOXN3O00409 490 aaPredicted RBP16.13■□□□□ 0.17
PFDN6-203ENST00000374610 CYP26A1O43174 497 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 FGF19O95750 216 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 ATF6P18850 670 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 BRD2P25440 801 aaKnown RBP16.13■□□□□ 0.17
PFDN6-203ENST00000374610 GBP2P32456 591 aaPredicted RBP16.13■□□□□ 0.17
PFDN6-203ENST00000374610 STAT1P42224 750 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 PTPN21Q16825 1174 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 ARHGAP17Q68EM7 881 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 DENND5BQ6ZUT9 1274 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 GET4Q7L5D6 327 aaPredicted RBP16.13■□□□□ 0.17
PFDN6-203ENST00000374610 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.13■□□□□ 0.17
PFDN6-203ENST00000374610 SHC3Q92529 594 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 ACSF2Q96CM8 615 aaPredicted RBP16.13■□□□□ 0.17
PFDN6-203ENST00000374610 SPATA17Q96L03 361 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 C8orf48Q96LL4 319 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 CEP295NLQ96MC4 621 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 NUP58Q9BVL2 599 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 DUSP16Q9BY84 665 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 TRIM5Q9C035 493 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 XPO4Q9C0E2 1151 aaKnown RBP16.13■□□□□ 0.17
PFDN6-203ENST00000374610 RBSNQ9H1K0 784 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 GANQ9H2C0 597 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 WDR6Q9NNW5 1121 aaKnown RBP16.13■□□□□ 0.17
PFDN6-203ENST00000374610 CDH22Q9UJ99 828 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 TSPAN16Q9UKR8 245 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 NR2E1Q9Y466 385 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 CLUHO75153 1309 aa16.13■□□□□ 0.17
PFDN6-203ENST00000374610 M0QYV0 167 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 RTN3O95197 1032 aaPredicted RBP16.12■□□□□ 0.17
PFDN6-203ENST00000374610 CCDC172P0C7W6 258 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 IL9P15248 144 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 NPR3P17342 541 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 SP100P23497 879 aaPredicted RBP16.12■□□□□ 0.17
PFDN6-203ENST00000374610 KRT9P35527 623 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 PDE6CP51160 858 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 BCAT1P54687 386 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 NTHL1P78549 312 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 SMAD2Q15796 467 aaKnown RBP16.12■□□□□ 0.17
PFDN6-203ENST00000374610 ARHGAP15Q53QZ3 475 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 PAQR9Q6ZVX9 377 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 FMNL3Q8IVF7 1028 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 HS6ST3Q8IZP7 471 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 NUP93Q8N1F7 819 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 ANKRD52Q8NB46 1076 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 ZNF397Q8NF99 534 aaPredicted RBP16.12■□□□□ 0.17
PFDN6-203ENST00000374610 RPGRIP1Q96KN7 1286 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 KCNK16Q96T55 309 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 POMKQ9H5K3 350 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 SLITRK6Q9H5Y7 841 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 AJAP1Q9UKB5 411 aaPredicted RBP16.12■□□□□ 0.17
PFDN6-203ENST00000374610 CNTN6Q9UQ52 1028 aa16.12■□□□□ 0.17
PFDN6-203ENST00000374610 CEP83Q9Y592 693 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms