RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 HARS2P49590 506 aaKnown RBP14.88□□□□□ -0.03
TRAF1-201ENST00000373887 RAB14P61106 215 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 MFSD4BQ5TF39 518 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 IGFLR1Q9H665 355 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 AAASQ9NRG9 546 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 FHOD1Q9Y613 1164 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 RASSF9O75901 435 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 KLC1Q07866 573 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 PTK7Q13308 1070 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 SLC35G2Q8TBE7 412 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 CENPTQ96BT3 561 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 TUBGCP3Q96CW5 907 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 ERP27Q96DN0 273 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 FAM129AQ9BZQ8 928 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 PAPOLBQ9NRJ5 636 aaKnown RBP14.88□□□□□ -0.03
TRAF1-201ENST00000373887 IGSF9BQ9UPX0 1349 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 SLC16A3O15427 465 aaKnown RBP14.88□□□□□ -0.03
TRAF1-201ENST00000373887 TDRD10Q5VZ19 366 aaKnown RBP14.88□□□□□ -0.03
TRAF1-201ENST00000373887 ATL2Q8NHH9 583 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 CNDP1Q96KN2 507 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 STAG3L1P0CL83 205 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 TAP1Q03518 808 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 DPYDQ12882 1025 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 ARHGEF7Q14155 803 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 PTRHD1Q6GMV3 140 aaKnown RBP14.88□□□□□ -0.03
TRAF1-201ENST00000373887 TSPAN17Q96FV3 270 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 C9orf72Q96LT7 481 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 SLC30A1Q9Y6M5 507 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 TBX3O15119 743 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 KCNK10P57789 538 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 VSNL1P62760 191 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 BNIPLQ7Z465 357 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 ARRDC4Q8NCT1 418 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 GPRASP2Q96D09 838 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 DIABLOQ9NR28 239 aa14.88□□□□□ -0.03
TRAF1-201ENST00000373887 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRAF1-201ENST00000373887 OSMRQ99650 979 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 ODC1P11926 461 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 TAF6P49848 677 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 MIB1Q86YT6 1006 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 SPATA4Q8NEY3 305 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 JADE3Q92613 823 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 RBM15Q96T37 977 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRAF1-201ENST00000373887 RIT2Q99578 217 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 COLEC11Q9BWP8 271 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 CAAP1Q9H8G2 361 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 TTLL13PA6NNM8 815 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 KLRC1P26715 233 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 ZNF200P98182 395 aaPredicted RBP14.87□□□□□ -0.03
TRAF1-201ENST00000373887 PCYOX1LQ8NBM8 494 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 CDCA5Q96FF9 252 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 C7orf25Q9BPX7 421 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 WNT10BO00744 389 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 POMCP01189 267 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 PCSK1P29120 753 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 AVPR1AP37288 418 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 GCLCP48506 637 aaPredicted RBP14.87□□□□□ -0.03
TRAF1-201ENST00000373887 CASP4P49662 377 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 RCOR2Q8IZ40 523 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 SH3GL1Q99961 368 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 PXMP2Q9NR77 195 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 SMARCAL1Q9NZC9 954 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 SPASTQ9UBP0 616 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 NRXN1Q9ULB1 1477 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 ZRANB3Q5FWF4 1079 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 SLC30A9Q6PML9 568 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 IPMKQ8NFU5 416 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 KCNK16Q96T55 309 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 CCSER1Q9C0I3 900 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 ARHGEF3Q9NR81 526 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 PSMC3IPQ9P2W1 217 aaPredicted RBP14.87□□□□□ -0.03
TRAF1-201ENST00000373887 TBX20Q9UMR3 447 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 NEU2Q9Y3R4 380 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 USP15Q9Y4E8 981 aaPredicted RBP14.87□□□□□ -0.03
TRAF1-201ENST00000373887 TNS2Q63HR2 1409 aa14.87□□□□□ -0.03
TRAF1-201ENST00000373887 LOC100653049A0A140TA62 436 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 B2RBV5 119 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 KRT34O76011 436 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 MTMR12Q9C0I1 747 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 MROH8Q9H579 483 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 TMEM39AQ9NV64 488 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 SESN1Q9Y6P5 492 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 HNRNPRO43390 633 aaKnown RBP14.86□□□□□ -0.03
TRAF1-201ENST00000373887 PHF2O75151 1096 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 APOA4P06727 396 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 HERVK_113P62684 666 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 DAB2IPQ5VWQ8 1189 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 DEPDC7Q96QD5 511 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 MRPL42Q9Y6G3 142 aaKnown RBP14.86□□□□□ -0.03
TRAF1-201ENST00000373887 TPST1O60507 370 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 AGTP01019 485 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 MBL2P11226 248 aaPredicted RBP14.86□□□□□ -0.03
TRAF1-201ENST00000373887 RPS7P62081 194 aaKnown RBP14.86□□□□□ -0.03
TRAF1-201ENST00000373887 TSGA10IPQ3SY00 556 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 C2CD6Q53TS8 623 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 SH3BP5LQ7L8J4 393 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 DNAJC9Q8WXX5 260 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 AGPAT5Q9NUQ2 364 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 GID8Q9NWU2 228 aa14.86□□□□□ -0.03
TRAF1-201ENST00000373887 LMTK2Q8IWU2 1503 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms