RNA–Protein interactions for RNA: ENST00000372192.3

PTCH2-201, Transcript of patched 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTCH2, Length 4,225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-201ENST00000372192 CRY2Q49AN0 593 aa11.93□□□□□ -0.5
PTCH2-201ENST00000372192 XRRA1Q6P2D8 792 aa11.93□□□□□ -0.5
PTCH2-201ENST00000372192 DNAAF3Q8N9W5 541 aa11.93□□□□□ -0.5
PTCH2-201ENST00000372192 GSDMBQ8TAX9 411 aa11.93□□□□□ -0.5
PTCH2-201ENST00000372192 PSPC1Q8WXF1 523 aaKnown RBP11.93□□□□□ -0.5
PTCH2-201ENST00000372192 NLRP4Q96MN2 994 aa11.93□□□□□ -0.5
PTCH2-201ENST00000372192 ZNF570Q96NI8 536 aa11.93□□□□□ -0.5
PTCH2-201ENST00000372192 DENND2DQ9H6A0 471 aaPredicted RBP11.93□□□□□ -0.5
PTCH2-201ENST00000372192 GRID1Q9ULK0 1009 aa11.93□□□□□ -0.5
PTCH2-201ENST00000372192 GOLGA8QA0A0J9YX86 632 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 GOLGA8OA6NCC3 632 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 GOLGA8NF8WBI6 632 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 TPBGLP0DKB5 382 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 ITGB5P18084 799 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 RANBP1P43487 201 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 SLC12A2P55011 1212 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 ROR2Q01974 943 aaKnown RBP11.92□□□□□ -0.5
PTCH2-201ENST00000372192 PTP4A2Q12974 167 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 MROH9Q5TGP6 573 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 HEATR6Q6AI08 1181 aaKnown RBP11.92□□□□□ -0.5
PTCH2-201ENST00000372192 LLGL2Q6P1M3 1020 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 TATDN1Q6P1N9 297 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 SEPT12Q8IYM1 358 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 CMTM5Q96DZ9 223 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 CGRRF1Q99675 332 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 TLK1Q9UKI8 766 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 GINS2Q9Y248 185 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 NOVP48745 357 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 SYTL5Q8TDW5 730 aaPredicted RBP11.92□□□□□ -0.5
PTCH2-201ENST00000372192 KCNK16Q96T55 309 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 NMRK1Q9NWW6 199 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 ZNF70Q9UC06 446 aaPredicted RBP11.92□□□□□ -0.5
PTCH2-201ENST00000372192 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.92□□□□□ -0.5
PTCH2-201ENST00000372192 DCAF8L1A6NGE4 600 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 KPNA7A9QM74 516 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 SMNDC1O75940 238 aaKnown RBP eCLIP11.92□□□□□ -0.5
PTCH2-201ENST00000372192 COPAP53621 1224 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 NOMO3P69849 1222 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 RARS2Q5T160 578 aaKnown RBP11.92□□□□□ -0.5
PTCH2-201ENST00000372192 C4orf50Q6ZRC1 276 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 TDRPQ86YL5 185 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 ACSS3Q9H6R3 686 aa11.92□□□□□ -0.5
PTCH2-201ENST00000372192 MAP3K20Q9NYL2 800 aaKnown RBP11.92□□□□□ -0.5
PTCH2-201ENST00000372192 DPPA5A6NC42 116 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 ITGAVP06756 1048 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 MMP14P50281 582 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 NCKAP1LP55160 1127 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 IFRD2Q12894 506 aaPredicted RBP11.91□□□□□ -0.5
PTCH2-201ENST00000372192 TCEAL1Q15170 157 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 GEN1Q17RS7 908 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 PHF13Q86YI8 300 aaPredicted RBP11.91□□□□□ -0.5
PTCH2-201ENST00000372192 FAM149B1Q96BN6 582 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 GPRASP2Q96D09 838 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 SRPK1Q96SB4 655 aaKnown RBP11.91□□□□□ -0.5
PTCH2-201ENST00000372192 MMADHCQ9H3L0 296 aaPredicted RBP11.91□□□□□ -0.5
PTCH2-201ENST00000372192 IL1RAPL1Q9NZN1 696 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 FBXO40Q9UH90 709 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 GLRA2P23416 452 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 FAAP100Q0VG06 881 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 SEZ6Q53EL9 994 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 ASAP3Q8TDY4 903 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 FAM192AQ9GZU8 254 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 SLC38A10Q9HBR0 1119 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 ARHGAP10A1A4S6 786 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 KBTBD13C9JR72 458 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 SPP2Q13103 211 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 CNGA3Q16281 694 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 GALNTL6Q49A17 601 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 KRT80Q6KB66 452 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 TRIML2Q8N7C3 387 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 C7orf31Q8N865 590 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 PPP2R3CQ969Q6 453 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 HIC2Q96JB3 615 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 MFSD14AQ96MC6 490 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 PDCD2LQ9BRP1 358 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 MRIQ9BWK5 157 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 GPR88Q9GZN0 384 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 EPB41L4BQ9H329 900 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 SMYD2Q9NRG4 433 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 CISHQ9NSE2 258 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.91□□□□□ -0.5
PTCH2-201ENST00000372192 COL18A1P39060 1754 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 MROH7Q68CQ1 1323 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 LOC100653049A0A140TA62 436 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 GSC2O15499 205 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 GPC4O75487 556 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 PIAS1O75925 651 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 KRT34O76011 436 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 RPL7AP62424 266 aaKnown RBP11.91□□□□□ -0.5
PTCH2-201ENST00000372192 FAXCQ5TGI0 409 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 CD101Q93033 1021 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 ST6GALNAC4Q9H4F1 302 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 RPAP3Q9H6T3 665 aaPredicted RBP11.91□□□□□ -0.5
PTCH2-201ENST00000372192 KCNK4Q9NYG8 393 aa11.91□□□□□ -0.5
PTCH2-201ENST00000372192 PMM2O15305 246 aa11.9□□□□□ -0.5
PTCH2-201ENST00000372192 NLRP11P59045 1033 aaKnown RBP11.9□□□□□ -0.5
PTCH2-201ENST00000372192 FASTKD3Q14CZ7 662 aaKnown RBP11.9□□□□□ -0.5
PTCH2-201ENST00000372192 ZACNQ401N2 412 aa11.9□□□□□ -0.5
PTCH2-201ENST00000372192 PTF1AQ7RTS3 328 aa11.9□□□□□ -0.5
PTCH2-201ENST00000372192 ANKS1BQ7Z6G8 1248 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms