RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 WNK3Q9BYP7 1800 aa10.88□□□□□ -0.67
PRPF38B-201ENST00000370021 RNASEH1O60930 286 aaKnown RBP10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 HLA-DRAP01903 254 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 SERPINB5P36952 375 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 AQP4P55087 323 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 CENPCQ03188 943 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 CDC16Q13042 620 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 MOGSQ13724 837 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 SIX1Q15475 284 aaPredicted RBP10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 TMEM63BQ5T3F8 832 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 KRT80Q6KB66 452 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 PCGF5Q86SE9 256 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 MYLK4Q86YV6 388 aaPredicted RBP10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 ACER1Q8TDN7 264 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 PPP2R3CQ969Q6 453 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 NGLY1Q96IV0 654 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 ANKRD27Q96NW4 1050 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 EBF4Q9BQW3 602 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 POLR3CQ9BUI4 534 aaPredicted RBP10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 CAAP1Q9H8G2 361 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 NGRNQ9NPE2 291 aaKnown RBP10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 POLLQ9UGP5 575 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 ZC3H7BQ9UGR2 993 aaKnown RBP10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 DNAJC16Q9Y2G8 782 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 PCDHB2Q9Y5E7 798 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 ZHX2Q9Y6X8 837 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 PLCH1Q4KWH8 1693 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 PHLPP1O60346 1717 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 CYP1A2P05177 515 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 FDX1P10109 184 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 HOXA7P31268 230 aaPredicted RBP10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 GTF2H1P32780 548 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 BPIFB4P59827 614 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 HADHQ16836 314 aaKnown RBP10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 AOC3Q16853 763 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 NETO2Q8NC67 525 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 OR6Y1Q8NGX8 325 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 FEZF2Q8TBJ5 459 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 PLEKHO2Q8TD55 490 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 CCDC17Q96LX7 622 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 TRAPPC9Q96Q05 1148 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 SPATA16Q9BXB7 569 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 MRPL1Q9BYD6 325 aaKnown RBP10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 MMADHCQ9H3L0 296 aaPredicted RBP10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 KRT82Q9NSB4 513 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 SLC7A8Q9UHI5 535 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 DTNAQ9Y4J8 743 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 DCAF8L1A6NGE4 600 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 IVDP26440 423 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 PMLP29590 882 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 MSS51Q4VC12 460 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 EFHC1Q5JVL4 640 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 HYIQ5T013 277 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 VWA5B1Q5TIE3 1220 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 FOXB2Q5VYV0 432 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 TRIM67Q6ZTA4 783 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 ANO5Q75V66 913 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 DRAXINQ8NBI3 349 aaPredicted RBP10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 PPP1R16BQ96T49 567 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 MIS12Q9H081 205 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 LIN28AQ9H9Z2 209 aaKnown RBP10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 TUFT1Q9NNX1 390 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 NOCTQ9UK39 431 aaKnown RBP10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 DOLKQ9UPQ8 538 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 TTLL3Q9Y4R7 772 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 DLEC1Q9Y238 1755 aa10.87□□□□□ -0.67
PRPF38B-201ENST00000370021 COL5A2P05997 1499 aaPredicted RBP10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 KCNN4O15554 427 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 ZBTB48P10074 688 aaPredicted RBP10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 DSG3P32926 999 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 SREBF1P36956 1147 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 ABCG1P45844 678 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 QARSP47897 775 aaKnown RBP10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 PKNOX1P55347 436 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 CCDC15Q0P6D6 951 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 DLG1Q12959 904 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 NPNTQ6UXI9 565 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 HPS6Q86YV9 775 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 TREML1Q86YW5 311 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 RCOR2Q8IZ40 523 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 SHKBP1Q8TBC3 707 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 ZSCAN18Q8TBC5 510 aaPredicted RBP10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 PSPC1Q8WXF1 523 aaKnown RBP10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 RBM17Q96I25 401 aaKnown RBP10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 SERAC1Q96JX3 654 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 HSD17B14Q9BPX1 270 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 UNKQ9C0B0 810 aaKnown RBP10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 PARVAQ9NVD7 372 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 PI4KBQ9UBF8 816 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 TAGLN3Q9UI15 199 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 LAMB2P55268 1798 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 TCRBV7S3A2A0A539 114 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 SPDYE16A6NNV3 312 aaPredicted RBP10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 DCXO43602 365 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 LIASO43766 372 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 HNRNPCL1O60812 293 aaKnown RBP10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 F7P08709 466 aaPredicted RBP10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 RFX1P22670 979 aa10.86□□□□□ -0.67
PRPF38B-201ENST00000370021 GDF10P55107 478 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms