RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 CYP3A43Q9HB55 503 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 UBE2TQ9NPD8 197 aaPredicted RBP9.37□□□□□ -0.91
SNX27-201ENST00000368838 MARCH5Q9NX47 278 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 KLK14Q9P0G3 267 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 NAGPAQ9UK23 515 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 ITGA11Q9UKX5 1188 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 SORCS3Q9UPU3 1222 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 COL4A3Q01955 1670 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 MYO15AQ9UKN7 3530 aa9.37□□□□□ -0.91
SNX27-201ENST00000368838 ANO9A1A5B4 782 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 ARL5CA6NH57 179 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 XPOTO43592 962 aaKnown RBP9.36□□□□□ -0.91
SNX27-201ENST00000368838 KIF5CO60282 957 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 NPTXRO95502 500 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 TNNC2P02585 160 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 ALDH2P05091 517 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 TNNT1P13805 278 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 PRLRP16471 622 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 ACO1P21399 889 aaKnown RBP9.36□□□□□ -0.91
SNX27-201ENST00000368838 AKAP5P24588 427 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 TNFSF9P41273 254 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 ZNF132P52740 706 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 PTPN5P54829 565 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 WNT7BP56706 349 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 USP46P62068 366 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 TUBB4BP68371 445 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 MTMR3Q13615 1198 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 CUL2Q13617 745 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 ARHGAP29Q52LW3 1261 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 ZBTB41Q5SVQ8 909 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 TRIM72Q6ZMU5 477 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 ZNF571Q7Z3V5 609 aaPredicted RBP9.36□□□□□ -0.91
SNX27-201ENST00000368838 TMEM105Q8N8V8 129 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 TRIM58Q8NG06 486 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 OR5B17Q8NGF7 314 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 SPATA18Q8TC71 538 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 VCPIP1Q96JH7 1222 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 SNX27Q96L92 541 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 NECTIN4Q96NY8 510 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 ISCUQ9H1K1 167 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 NXF3Q9H4D5 531 aaKnown RBP9.36□□□□□ -0.91
SNX27-201ENST00000368838 MAN1C1Q9NR34 630 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 MRPL17Q9NRX2 175 aaKnown RBP9.36□□□□□ -0.91
SNX27-201ENST00000368838 DZANK1Q9NVP4 752 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 NOCTQ9UK39 431 aaKnown RBP9.36□□□□□ -0.91
SNX27-201ENST00000368838 PCDHA13Q9Y5I0 950 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 PTPRJQ12913 1337 aa9.36□□□□□ -0.91
SNX27-201ENST00000368838 PTPRZ1P23471 2315 aaPredicted RBP9.36□□□□□ -0.91
SNX27-201ENST00000368838 RIF1Q5UIP0 2472 aaKnown RBP9.35□□□□□ -0.91
SNX27-201ENST00000368838 A0A087X0T9 212 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 TEX28O15482 410 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 MEFVO15553 781 aaPredicted RBP9.35□□□□□ -0.91
SNX27-201ENST00000368838 RFPL2O75678 378 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 MTA2O94776 668 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 URODP06132 367 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 TMEM191BP0C7N4 346 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 FAM228BP0C875 321 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 RPL17P18621 184 aaKnown RBP9.35□□□□□ -0.91
SNX27-201ENST00000368838 LRPAP1P30533 357 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 PNPLA4P41247 253 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 MATR3P43243 847 aaKnown RBP eCLIP9.35□□□□□ -0.91
SNX27-201ENST00000368838 MAGEA1P43355 309 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 CLCN4P51793 760 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 YARSP54577 528 aaKnown RBP9.35□□□□□ -0.91
SNX27-201ENST00000368838 NOP14P78316 857 aaKnown RBP9.35□□□□□ -0.91
SNX27-201ENST00000368838 IFI16Q16666 785 aaKnown RBP9.35□□□□□ -0.91
SNX27-201ENST00000368838 ALKBH5Q6P6C2 394 aaKnown RBP9.35□□□□□ -0.91
SNX27-201ENST00000368838 DPH6Q7L8W6 267 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 LIMS2Q7Z4I7 341 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 PALB2Q86YC2 1186 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 ARHGEF19Q8IW93 802 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 EFCAB13Q8IY85 973 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 COLGALT2Q8IYK4 626 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 HACE1Q8IYU2 909 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 CEP120Q8N960 986 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 PRR7Q8TB68 274 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 HASPINQ8TF76 798 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 RSAD2Q8WXG1 361 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 DDX1Q92499 740 aaKnown RBP9.35□□□□□ -0.91
SNX27-201ENST00000368838 ATOH1Q92858 354 aaPredicted RBP9.35□□□□□ -0.91
SNX27-201ENST00000368838 TMEM175Q9BSA9 504 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 EMILIN2Q9BXX0 1053 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 TRIM6Q9C030 488 aaPredicted RBP9.35□□□□□ -0.91
SNX27-201ENST00000368838 ZNF518BQ9C0D4 1074 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 NIF3L1Q9GZT8 377 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 CXCL16Q9H2A7 254 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 DEF6Q9H4E7 631 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 SFXN1Q9H9B4 322 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 UBN1Q9NPG3 1134 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 ADAMTS1Q9UHI8 967 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 AJAP1Q9UKB5 411 aaPredicted RBP9.35□□□□□ -0.91
SNX27-201ENST00000368838 KIAA1257Q9ULG3 409 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 UBQLN1Q9UMX0 589 aaKnown RBP9.35□□□□□ -0.91
SNX27-201ENST00000368838 IRAK3Q9Y616 596 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 FAM186AA6NE01 2351 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 CFAP54Q96N23 3096 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 DMDP11532 3685 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 VPS13AQ96RL7 3174 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 CACNA1IQ9P0X4 2223 aa9.35□□□□□ -0.91
SNX27-201ENST00000368838 ANKRD62A6NC57 917 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms