RNA–Protein interactions for RNA: ENST00000368516.1

C1orf43-203, Transcript of chromosome 1 open reading frame 43, humanhuman

TSL 2 BASIC

Gene C1orf43, Length 872 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf43-203ENST00000368516 SPATA17Q96L03 361 aa17.16■□□□□ 0.34
C1orf43-203ENST00000368516 TRPC7Q9HCX4 862 aa17.16■□□□□ 0.34
C1orf43-203ENST00000368516 SLC39A2Q9NP94 309 aa17.16■□□□□ 0.34
C1orf43-203ENST00000368516 RAB23Q9ULC3 237 aa17.16■□□□□ 0.34
C1orf43-203ENST00000368516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.15■□□□□ 0.34
C1orf43-203ENST00000368516 TRAV19A0A0A6YYK7 116 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 ATP2C2O75185 946 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 TACC1O75410 805 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 PDGFRBP09619 1106 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 FAM163BP0C2L3 166 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 USP17L7P0C7H9 530 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 SLFN14P0C7P3 912 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 LMO2P25791 158 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 TNNC1P63316 161 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 AMPD2Q01433 879 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 DNM1Q05193 864 aaKnown RBP17.15■□□□□ 0.34
C1orf43-203ENST00000368516 PDGFRLQ15198 375 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 KNOP1Q1ED39 458 aaKnown RBP17.15■□□□□ 0.34
C1orf43-203ENST00000368516 WDR44Q5JSH3 913 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 SNX25Q9H3E2 840 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 EBF3Q9H4W6 596 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 CRTAC1Q9NQ79 661 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 HPS4Q9NQG7 708 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 GMEB2Q9UKD1 530 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 RCOR1Q9UKL0 485 aa17.15■□□□□ 0.34
C1orf43-203ENST00000368516 HELZP42694 1942 aaKnown RBP17.15■□□□□ 0.34
C1orf43-203ENST00000368516 TRIM66O15016 1216 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 EXOC3O60645 756 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 STAU1O95793 577 aaKnown RBP17.14■□□□□ 0.33
C1orf43-203ENST00000368516 CST3P01034 146 aaPredicted RBP17.14■□□□□ 0.33
C1orf43-203ENST00000368516 CKMP06732 381 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 BDNFP23560 247 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 ANXA13P27216 316 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 GNL1P36915 607 aaPredicted RBP17.14■□□□□ 0.33
C1orf43-203ENST00000368516 GRIK1P39086 918 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 PDE6CP51160 858 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 CYP27A1Q02318 531 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 FAM160A1Q05DH4 1040 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 GRSF1Q12849 480 aaKnown RBP eCLIP17.14■□□□□ 0.33
C1orf43-203ENST00000368516 TRPC3Q13507 836 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 PKP1Q13835 747 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 TRIM68Q6AZZ1 485 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 MYCBPAPQ8TBZ2 947 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 EXOC4Q96A65 974 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 RMDN1Q96DB5 314 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 EXOC1Q9NV70 894 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 EHD2Q9NZN4 543 aa17.14■□□□□ 0.33
C1orf43-203ENST00000368516 ATICP31939 592 aa17.13■□□□□ 0.33
C1orf43-203ENST00000368516 CNR2P34972 360 aa17.13■□□□□ 0.33
C1orf43-203ENST00000368516 USP4Q13107 963 aa17.13■□□□□ 0.33
C1orf43-203ENST00000368516 KCNB1Q14721 858 aa17.13■□□□□ 0.33
C1orf43-203ENST00000368516 MTF1Q14872 753 aa17.13■□□□□ 0.33
C1orf43-203ENST00000368516 ZNF77Q15935 545 aa17.13■□□□□ 0.33
C1orf43-203ENST00000368516 WDR72Q3MJ13 1102 aa17.13■□□□□ 0.33
C1orf43-203ENST00000368516 TMEM196Q5HYL7 178 aa17.13■□□□□ 0.33
C1orf43-203ENST00000368516 GRAMD1CQ8IYS0 662 aa17.13■□□□□ 0.33
C1orf43-203ENST00000368516 CPA6Q8N4T0 437 aa17.13■□□□□ 0.33
C1orf43-203ENST00000368516 SPRYD3Q8NCJ5 442 aa17.13■□□□□ 0.33
C1orf43-203ENST00000368516 OR6B3Q8NGW1 331 aa17.13■□□□□ 0.33
C1orf43-203ENST00000368516 SYAP1Q96A49 352 aaPredicted RBP17.13■□□□□ 0.33
C1orf43-203ENST00000368516 PCED1BQ96HM7 432 aa17.13■□□□□ 0.33
C1orf43-203ENST00000368516 MRPL45Q9BRJ2 306 aaKnown RBP17.13■□□□□ 0.33
C1orf43-203ENST00000368516 SERTAD1Q9UHV2 236 aa17.13■□□□□ 0.33
C1orf43-203ENST00000368516 DNAH14Q0VDD8 3507 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 CHURC1-FNTBB4DL54 471 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 K7ESF4 209 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 TRDMT1O14717 391 aaKnown RBP17.12■□□□□ 0.33
C1orf43-203ENST00000368516 ACTN4O43707 911 aaKnown RBP17.12■□□□□ 0.33
C1orf43-203ENST00000368516 PHACTR2O75167 634 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 ARSAP15289 507 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 PFKLP17858 780 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 HOXA6P31267 233 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 FNTBP49356 437 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 AP3M2P53677 418 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 PSMD2Q13200 908 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 PUM1Q14671 1186 aaKnown RBP eCLIP17.12■□□□□ 0.33
C1orf43-203ENST00000368516 MDH1BQ5I0G3 518 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 LAIR1Q6GTX8 287 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 DENND5BQ6ZUT9 1274 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 LONP2Q86WA8 852 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 ARL14EPQ8N8R7 260 aaPredicted RBP17.12■□□□□ 0.33
C1orf43-203ENST00000368516 RIN3Q8TB24 985 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 OSCP1Q8WVF1 389 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 ZNF516Q92618 1163 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 ATP2A3Q93084 1043 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 CYP2S1Q96SQ9 504 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 GZF1Q9H116 711 aaPredicted RBP17.12■□□□□ 0.33
C1orf43-203ENST00000368516 DUS2Q9NX74 493 aaKnown RBP17.12■□□□□ 0.33
C1orf43-203ENST00000368516 TRPM5Q9NZQ8 1165 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 USP25Q9UHP3 1055 aa17.12■□□□□ 0.33
C1orf43-203ENST00000368516 C2orf78A6NCI8 922 aa17.11■□□□□ 0.33
C1orf43-203ENST00000368516 OTOL1A6NHN0 477 aaPredicted RBP17.11■□□□□ 0.33
C1orf43-203ENST00000368516 KLRC4O43908 158 aa17.11■□□□□ 0.33
C1orf43-203ENST00000368516 MYL1P05976 194 aa17.11■□□□□ 0.33
C1orf43-203ENST00000368516 TCF3P15923 654 aa17.11■□□□□ 0.33
C1orf43-203ENST00000368516 PTPN1P18031 435 aaKnown RBP17.11■□□□□ 0.33
C1orf43-203ENST00000368516 HDCP19113 662 aa17.11■□□□□ 0.33
C1orf43-203ENST00000368516 PPP3CCP48454 512 aa17.11■□□□□ 0.33
C1orf43-203ENST00000368516 IFNAR2P48551 515 aa17.11■□□□□ 0.33
C1orf43-203ENST00000368516 MYL6P60660 151 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms