RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 HSPA8P11142 646 aaKnown RBP13.81□□□□□ -0.2
PTPRK-204ENST00000368210 SLC26A2P50443 739 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 CACNA2D1P54289 1103 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 FASTKD1Q53R41 847 aaKnown RBP13.81□□□□□ -0.2
PTPRK-204ENST00000368210 GNASQ5JWF2 1037 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 TEDDM1Q5T9Z0 273 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 PPIL6Q8IXY8 311 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 TRAPPC9Q96Q05 1148 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 TLR10Q9BXR5 811 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 EEF2KO00418 725 aaKnown RBP13.81□□□□□ -0.2
PTPRK-204ENST00000368210 GNGT2O14610 69 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 GLI1P08151 1106 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 TAF6P49848 677 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 IL17AQ16552 155 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 RIBC1Q8N443 379 aaPredicted RBP13.81□□□□□ -0.2
PTPRK-204ENST00000368210 SLC26A7Q8TE54 656 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 SPIRE2Q8WWL2 714 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 ZNF518BQ9C0D4 1074 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 SPATC1LQ9H0A9 340 aa13.81□□□□□ -0.2
PTPRK-204ENST00000368210 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.81□□□□□ -0.21e-12■■■□□ 17.4
PTPRK-204ENST00000368210 MRC1P22897 1456 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 PLSCR1O15162 318 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 NFKBIAP25963 317 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 MAP4P27816 1152 aaKnown RBP13.8□□□□□ -0.2
PTPRK-204ENST00000368210 PNPLA4P41247 253 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 RECQLP46063 649 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-204ENST00000368210 ZNF235Q14590 738 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 DCAF4L1Q3SXM0 396 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 TMCO5AQ8N6Q1 288 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 GLIS3Q8NEA6 775 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 SIK3Q9Y2K2 1263 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 SNX2O60749 519 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 TGFB3P10600 412 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 STIP1P31948 543 aaKnown RBP13.8□□□□□ -0.2
PTPRK-204ENST00000368210 PTK7Q13308 1070 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 PDK1Q15118 436 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 CRELD2Q6UXH1 353 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-204ENST00000368210 RNF135Q8IUD6 432 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 RFWD2Q8NHY2 731 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 ARL8AQ96BM9 186 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 KLHL25Q9H0H3 589 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 DCLRE1BQ9H816 532 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 LRCH1Q9Y2L9 728 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 PPP2R3BQ9Y5P8 575 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 TMEM150BA6NC51 233 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 AP3B1O00203 1094 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 MEIS2O14770 477 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 PROSCO94903 275 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 SERPINB9P50453 376 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 HUNKP57058 714 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 MYL6P60660 151 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 ORC1Q13415 861 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 MORF4L2Q15014 288 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 GLRA4Q5JXX5 417 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 TMTC4Q5T4D3 741 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 TATDN2Q93075 761 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 ZBED2Q9BTP6 218 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 TSSK1BQ9BXA7 367 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 CISHQ9NSE2 258 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 TJP2Q9UDY2 1190 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 KIAA1257Q9ULG3 409 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 F8W8V4 182 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 NSUN2Q08J23 767 aaKnown RBP eCLIP13.8□□□□□ -0.2
PTPRK-204ENST00000368210 WDR49Q8IV35 697 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 SLC7A14Q8TBB6 771 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 SERPINB12Q96P63 405 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 KLF6Q99612 283 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-204ENST00000368210 LRRC4BQ9NT99 713 aa13.8□□□□□ -0.2
PTPRK-204ENST00000368210 SCHIP1Q9P0W5 487 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-204ENST00000368210 DDX3XO00571 662 aaKnown RBP eCLIP13.79□□□□□ -0.28e-10■□□□□ 11.1
PTPRK-204ENST00000368210 TSPAN9O75954 239 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 CYP2C8P10632 490 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 VDRP11473 427 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 RARGP13631 454 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 IRGCQ6NXR0 463 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 TMC5Q6UXY8 1006 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 FRA10AC1Q70Z53 315 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 KDELC2Q7Z4H8 507 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 RANBP17Q9H2T7 1088 aaKnown RBP13.79□□□□□ -0.2
PTPRK-204ENST00000368210 KCND1Q9NSA2 647 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 GSTA4O15217 222 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 CD302Q8IX05 232 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 MDM1Q8TC05 714 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 VPS33BQ9H267 617 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 RAB21Q9UL25 225 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 SLIT3O75094 1523 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 SNRPAP09012 282 aaKnown RBP13.79□□□□□ -0.2
PTPRK-204ENST00000368210 CCNHP51946 323 aaPredicted RBP13.79□□□□□ -0.2
PTPRK-204ENST00000368210 OAZ1P54368 228 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 IL1RL1Q01638 556 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 KCNA1Q09470 495 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 KCNT1Q5JUK3 1230 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 C11orf63Q6NUN7 778 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 CCDC124Q96CT7 223 aaKnown RBP13.79□□□□□ -0.2
PTPRK-204ENST00000368210 OMA1Q96E52 524 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 ATXN10Q9UBB4 475 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 SNX5Q9Y5X3 404 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 STAG3L1P0CL83 205 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 TM4SF1P30408 202 aa13.79□□□□□ -0.2
PTPRK-204ENST00000368210 PSEN1P49768 467 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms