RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ABI2Q9NYB9 513 aaPredicted RBP15.85■□□□□ 0.13
VAMP4-202ENST00000367740 MAGED2Q9UNF1 606 aaPredicted RBP15.85■□□□□ 0.13
VAMP4-202ENST00000367740 STK36Q9NRP7 1315 aa15.85■□□□□ 0.13
VAMP4-202ENST00000367740 MYOFQ9NZM1 2061 aa15.85■□□□□ 0.13
VAMP4-202ENST00000367740 SPTA1P02549 2419 aa15.85■□□□□ 0.13
VAMP4-202ENST00000367740 DTNBO60941 627 aa15.84■□□□□ 0.13
VAMP4-202ENST00000367740 USP17L7P0C7H9 530 aa15.84■□□□□ 0.13
VAMP4-202ENST00000367740 XBP1P17861 261 aa15.84■□□□□ 0.13
VAMP4-202ENST00000367740 KIR2DL1P43626 348 aaPredicted RBP15.84■□□□□ 0.13
VAMP4-202ENST00000367740 GRIK2Q13002 908 aa15.84■□□□□ 0.13
VAMP4-202ENST00000367740 PLEKHG6Q3KR16 790 aa15.84■□□□□ 0.13
VAMP4-202ENST00000367740 ZC2HC1CQ53FD0 456 aaPredicted RBP15.84■□□□□ 0.13
VAMP4-202ENST00000367740 EOGTQ5NDL2 527 aa15.84■□□□□ 0.13
VAMP4-202ENST00000367740 EMC10Q5UCC4 262 aa15.84■□□□□ 0.13
VAMP4-202ENST00000367740 DAW1Q8N136 415 aa15.84■□□□□ 0.13
VAMP4-202ENST00000367740 SH3RF2Q8TEC5 729 aa15.84■□□□□ 0.13
VAMP4-202ENST00000367740 ZNF274Q96GC6 653 aaPredicted RBP15.84■□□□□ 0.13
VAMP4-202ENST00000367740 HSPA12BQ96MM6 686 aa15.84■□□□□ 0.13
VAMP4-202ENST00000367740 LARP6Q9BRS8 491 aaKnown RBP15.84■□□□□ 0.13
VAMP4-202ENST00000367740 BHMT2Q9H2M3 363 aa15.84■□□□□ 0.13
VAMP4-202ENST00000367740 PLEKHA5Q9HAU0 1116 aa15.84■□□□□ 0.13
VAMP4-202ENST00000367740 MYH11P35749 1972 aa15.84■□□□□ 0.13
VAMP4-202ENST00000367740 UNC79Q9P2D8 2635 aa15.83■□□□□ 0.13
VAMP4-202ENST00000367740 TRAV19A0A0A6YYK7 116 aa15.83■□□□□ 0.12
VAMP4-202ENST00000367740 IGHV1OR15-9A0A0B4J2B8 117 aa15.83■□□□□ 0.12
VAMP4-202ENST00000367740 TOM1L1O75674 476 aa15.83■□□□□ 0.12
VAMP4-202ENST00000367740 CYP17A1P05093 508 aa15.83■□□□□ 0.12
VAMP4-202ENST00000367740 CSH1P0DML2 217 aa15.83■□□□□ 0.12
VAMP4-202ENST00000367740 CSH2P0DML3 217 aa15.83■□□□□ 0.12
VAMP4-202ENST00000367740 TCF3P15923 654 aa15.83■□□□□ 0.12
VAMP4-202ENST00000367740 KRT2P35908 639 aa15.83■□□□□ 0.12
VAMP4-202ENST00000367740 SDHAF4Q5VUM1 108 aa15.83■□□□□ 0.12
VAMP4-202ENST00000367740 SPRYD3Q8NCJ5 442 aa15.83■□□□□ 0.12
VAMP4-202ENST00000367740 YTHDC1Q96MU7 727 aaKnown RBP15.83■□□□□ 0.12
VAMP4-202ENST00000367740 HAPLN2Q9GZV7 340 aa15.83■□□□□ 0.12
VAMP4-202ENST00000367740 GCNT4Q9P109 453 aa15.83■□□□□ 0.12
VAMP4-202ENST00000367740 CALCOCO1Q9P1Z2 691 aa15.83■□□□□ 0.12
VAMP4-202ENST00000367740 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.83■□□□□ 0.12
VAMP4-202ENST00000367740 FAM149AA5PLN7 773 aa15.82■□□□□ 0.12
VAMP4-202ENST00000367740 KAT7O95251 611 aa15.82■□□□□ 0.12
VAMP4-202ENST00000367740 ATXN1LP0C7T5 689 aaKnown RBP15.82■□□□□ 0.12
VAMP4-202ENST00000367740 GABRG2P18507 467 aa15.82■□□□□ 0.12
VAMP4-202ENST00000367740 TNFSF9P41273 254 aa15.82■□□□□ 0.12
VAMP4-202ENST00000367740 SLC6A11P48066 632 aa15.82■□□□□ 0.12
VAMP4-202ENST00000367740 MCL1Q07820 350 aa15.82■□□□□ 0.12
VAMP4-202ENST00000367740 SMARCB1Q12824 385 aa15.82■□□□□ 0.12
VAMP4-202ENST00000367740 ECM1Q16610 540 aa15.82■□□□□ 0.12
VAMP4-202ENST00000367740 ARL14EPQ8N8R7 260 aaPredicted RBP15.82■□□□□ 0.12
VAMP4-202ENST00000367740 TRIML1Q8N9V2 468 aa15.82■□□□□ 0.12
VAMP4-202ENST00000367740 TRMT2BQ96GJ1 504 aaKnown RBP15.82■□□□□ 0.12
VAMP4-202ENST00000367740 PNMA5Q96PV4 448 aa15.82■□□□□ 0.12
VAMP4-202ENST00000367740 KMT5AQ9NQR1 393 aa15.82■□□□□ 0.12
VAMP4-202ENST00000367740 STK24Q9Y6E0 443 aa15.82■□□□□ 0.12
VAMP4-202ENST00000367740 COL12A1Q99715 3063 aa15.82■□□□□ 0.12
VAMP4-202ENST00000367740 PTPN13Q12923 2485 aa15.82■□□□□ 0.12
VAMP4-202ENST00000367740 C2orf78A6NCI8 922 aa15.81■□□□□ 0.12
VAMP4-202ENST00000367740 LACTBL1A8MY62 500 aa15.81■□□□□ 0.12
VAMP4-202ENST00000367740 NOL4O94818 638 aa15.81■□□□□ 0.12
VAMP4-202ENST00000367740 PSMA5P28066 241 aa15.81■□□□□ 0.12
VAMP4-202ENST00000367740 ZXDBP98169 803 aa15.81■□□□□ 0.12
VAMP4-202ENST00000367740 PPP2R3AQ06190 1150 aa15.81■□□□□ 0.12
VAMP4-202ENST00000367740 SCRN1Q12765 414 aa15.81■□□□□ 0.12
VAMP4-202ENST00000367740 BMP2KLQ5H9B9 411 aa15.81■□□□□ 0.12
VAMP4-202ENST00000367740 PCSK4Q6UW60 755 aa15.81■□□□□ 0.12
VAMP4-202ENST00000367740 C12orf40Q86WS4 652 aa15.81■□□□□ 0.12
VAMP4-202ENST00000367740 GALNT15Q8N3T1 639 aa15.81■□□□□ 0.12
VAMP4-202ENST00000367740 PDCD7Q8N8D1 485 aaKnown RBP15.81■□□□□ 0.12
VAMP4-202ENST00000367740 SPATA18Q8TC71 538 aa15.81■□□□□ 0.12
VAMP4-202ENST00000367740 SETD7Q8WTS6 366 aaKnown RBP15.81■□□□□ 0.12
VAMP4-202ENST00000367740 FCRL3Q96P31 734 aaPredicted RBP15.81■□□□□ 0.12
VAMP4-202ENST00000367740 PNKPQ96T60 521 aa15.81■□□□□ 0.12
VAMP4-202ENST00000367740 TMLHEQ9NVH6 421 aa15.81■□□□□ 0.12
VAMP4-202ENST00000367740 UXTQ9UBK9 157 aaPredicted RBP15.81■□□□□ 0.12
VAMP4-202ENST00000367740 COL6A6A6NMZ7 2263 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 SLC16A4O15374 487 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 ARHGAP6O43182 974 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 XPOTO43592 962 aaKnown RBP15.8■□□□□ 0.12
VAMP4-202ENST00000367740 HIP1RO75146 1068 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 APODP05090 189 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 CLTAP09496 248 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 EIF2DP41214 584 aaKnown RBP15.8■□□□□ 0.12
VAMP4-202ENST00000367740 MAPK7Q13164 816 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 SAFBQ15424 915 aaKnown RBP eCLIP15.8■□□□□ 0.12
VAMP4-202ENST00000367740 SPATA1Q5VX52 437 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 C9orf57Q5W0N0 161 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 RUFY3Q7L099 469 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 ERMNQ8TAM6 284 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 LRRC15Q8TF66 581 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 MYRFLQ96LU7 910 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 PI4K2AQ9BTU6 479 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 ZDHHC5Q9C0B5 715 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 FAM124BQ9H5Z6 455 aaPredicted RBP15.8■□□□□ 0.12
VAMP4-202ENST00000367740 IL21RQ9HBE5 538 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 SUSD2Q9UGT4 822 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 DSEQ9UL01 958 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 ARHGAP26Q9UNA1 814 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 RBM19Q9Y4C8 960 aaKnown RBP15.8■□□□□ 0.12
VAMP4-202ENST00000367740 PCDHB5Q9Y5E4 795 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 PIEZO2Q9H5I5 2752 aa15.8■□□□□ 0.12
VAMP4-202ENST00000367740 A0A0A0MRY4 1105 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms