RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 ZDHHC14Q8IZN3 488 aa15.77■□□□□ 0.11
NEK2-201ENST00000366998 ANKRD52Q8NB46 1076 aa15.77■□□□□ 0.11
NEK2-201ENST00000366998 C3orf58Q8NDZ4 430 aa15.77■□□□□ 0.11
NEK2-201ENST00000366998 SLC35F5Q8WV83 523 aa15.77■□□□□ 0.11
NEK2-201ENST00000366998 RNF25Q96BH1 459 aaPredicted RBP15.77■□□□□ 0.11
NEK2-201ENST00000366998 PAAF1Q9BRP4 392 aa15.77■□□□□ 0.11
NEK2-201ENST00000366998 TRIM51Q9BSJ1 452 aa15.77■□□□□ 0.11
NEK2-201ENST00000366998 HEMGNQ9BXL5 484 aa15.77■□□□□ 0.11
NEK2-201ENST00000366998 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.77■□□□□ 0.11
NEK2-201ENST00000366998 UTP11Q9Y3A2 253 aaKnown RBP15.77■□□□□ 0.11
NEK2-201ENST00000366998 BRCA2P51587 3418 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 DNM1LO00429 736 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 ATP2C2O75185 946 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 RALAP11233 206 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 DHX34Q14147 1143 aaKnown RBP15.76■□□□□ 0.11
NEK2-201ENST00000366998 HLTFQ14527 1009 aaKnown RBP eCLIP15.76■□□□□ 0.11
NEK2-201ENST00000366998 SIX1Q15475 284 aaPredicted RBP15.76■□□□□ 0.11
NEK2-201ENST00000366998 LRRC38Q5VT99 294 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 CCDC137Q6PK04 289 aaKnown RBP15.76■□□□□ 0.11
NEK2-201ENST00000366998 SND1Q7KZF4 910 aaKnown RBP eCLIP15.76■□□□□ 0.11
NEK2-201ENST00000366998 RBM41Q96IZ5 413 aaKnown RBP15.76■□□□□ 0.11
NEK2-201ENST00000366998 SLC4A5Q9BY07 1137 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 RGS18Q9NS28 235 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 RASAL2Q9UJF2 1139 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 TIMM13Q9Y5L4 95 aaPredicted RBP15.76■□□□□ 0.11
NEK2-201ENST00000366998 CEP350Q5VT06 3117 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 MAP2K7O14733 419 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 GRAP2O75791 330 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 PTPN1P18031 435 aaKnown RBP15.76■□□□□ 0.11
NEK2-201ENST00000366998 GPD1P21695 349 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 TRADDQ15628 312 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 UPP1Q16831 310 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 HADHQ16836 314 aaKnown RBP15.76■□□□□ 0.11
NEK2-201ENST00000366998 LRRC8DQ7L1W4 858 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 RCOR2Q8IZ40 523 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 TMEM86AQ8N2M4 240 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 ACSF2Q96CM8 615 aaPredicted RBP15.76■□□□□ 0.11
NEK2-201ENST00000366998 PIWIL1Q96J94 861 aaKnown RBP15.76■□□□□ 0.11
NEK2-201ENST00000366998 DEFB118Q96PH6 123 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 HERPUD2Q9BSE4 406 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 MED10Q9BTT4 135 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 OSBPL8Q9BZF1 889 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 TRIM31Q9BZY9 425 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 RAB17Q9H0T7 212 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 ZWILCHQ9H900 591 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 DDX43Q9NXZ2 648 aaKnown RBP15.76■□□□□ 0.11
NEK2-201ENST00000366998 DDX56Q9NY93 547 aaKnown RBP15.76■□□□□ 0.11
NEK2-201ENST00000366998 PTPN22Q9Y2R2 807 aa15.76■□□□□ 0.11
NEK2-201ENST00000366998 FAM187AA6NFU0 413 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 LRCH4O75427 683 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 RNF8O76064 485 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 FAM163BP0C2L3 166 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 SELPP16109 830 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 TKTP29401 623 aaKnown RBP15.75■□□□□ 0.11
NEK2-201ENST00000366998 COILP38432 576 aaPredicted RBP15.75■□□□□ 0.11
NEK2-201ENST00000366998 CUL1Q13616 776 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 MTFR1Q15390 333 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 CYP1B1Q16678 543 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 CCDC142Q17RM4 750 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 PAN2Q504Q3 1202 aaKnown RBP15.75■□□□□ 0.11
NEK2-201ENST00000366998 MDH1BQ5I0G3 518 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 TXNRD3NBQ6F5E7 133 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 TTC27Q6P3X3 843 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 EMBQ6PCB8 327 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 TMEM110Q86TL2 294 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 ZNF598Q86UK7 904 aaKnown RBP15.75■□□□□ 0.11
NEK2-201ENST00000366998 DDX42Q86XP3 938 aaKnown RBP eCLIP15.75■□□□□ 0.11
NEK2-201ENST00000366998 CCDC105Q8IYK2 499 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 KRT222Q8N1A0 295 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 STK32AQ8WU08 396 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 C1orf54Q8WWF1 131 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 DPH5Q9H2P9 285 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 ASNSD1Q9NWL6 643 aa15.75■□□□□ 0.11
NEK2-201ENST00000366998 TSC2P49815 1807 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 C9IYK1 514 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 GABRDO14764 452 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 B3GAT3O94766 335 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 ODC1P11926 461 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 LCP1P13796 627 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 PDGFRAP16234 1089 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 PLA2G4AP47712 749 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 LHX1P48742 406 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 CDR1P51861 262 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 SLC6A3Q01959 620 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 TUSC3Q13454 348 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 BFSP2Q13515 415 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 SNX1Q13596 522 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 KAZNQ674X7 775 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 OLFML1Q6UWY5 402 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 SLC24A5Q71RS6 500 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 RTN4RL1Q86UN2 441 aaPredicted RBP15.74■□□□□ 0.11
NEK2-201ENST00000366998 JAMLQ86YT9 394 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 SCUBE3Q8IX30 993 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 C12orf50Q8NA57 414 aaPredicted RBP15.74■□□□□ 0.11
NEK2-201ENST00000366998 HASPINQ8TF76 798 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 RXFP2Q8WXD0 754 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 LINC01599Q8WXQ3 324 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 RUNDC3BQ96NL0 473 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 SLITRK1Q96PX8 696 aa15.74■□□□□ 0.11
NEK2-201ENST00000366998 SYT15Q9BQS2 421 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms