RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 PRR12Q9ULL5 1215 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 FRMPD4Q14CM0 1322 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 MAP3K6O95382 1288 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 INHBAP08476 426 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 EIF4BP23588 611 aaKnown RBP13.27□□□□□ -0.28
VAMP1-201ENST00000361716 PRELPP51888 382 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 SH3BGRP55822 239 aaPredicted RBP13.27□□□□□ -0.28
VAMP1-201ENST00000361716 BASP1P80723 227 aaKnown RBP13.27□□□□□ -0.28
VAMP1-201ENST00000361716 HSP90AA5PQ58FG0 334 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 TRIM50Q86XT4 487 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 HOMEZQ8IX15 550 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 AGR3Q8TD06 166 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 WDR18Q9BV38 432 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 GPR88Q9GZN0 384 aa13.27□□□□□ -0.28
VAMP1-201ENST00000361716 SNED1Q8TER0 1413 aa13.27□□□□□ -0.29
VAMP1-201ENST00000361716 LRP5O75197 1615 aa13.27□□□□□ -0.29
VAMP1-201ENST00000361716 DDX60Q8IY21 1712 aaKnown RBP13.27□□□□□ -0.29
VAMP1-201ENST00000361716 CFLARO15519 480 aa13.27□□□□□ -0.29
VAMP1-201ENST00000361716 FOSP01100 380 aaPredicted RBP13.27□□□□□ -0.29
VAMP1-201ENST00000361716 PENKP01210 267 aaPredicted RBP13.27□□□□□ -0.29
VAMP1-201ENST00000361716 UQCRBP14927 111 aa13.27□□□□□ -0.29
VAMP1-201ENST00000361716 MAN1A1P33908 653 aa13.27□□□□□ -0.29
VAMP1-201ENST00000361716 GEMIN4P57678 1058 aaKnown RBP13.27□□□□□ -0.29
VAMP1-201ENST00000361716 TMEM270Q6UE05 265 aa13.27□□□□□ -0.29
VAMP1-201ENST00000361716 DENND5BQ6ZUT9 1274 aa13.27□□□□□ -0.29
VAMP1-201ENST00000361716 ACAD11Q709F0 780 aa13.27□□□□□ -0.29
VAMP1-201ENST00000361716 RNF148Q8N7C7 305 aa13.27□□□□□ -0.29
VAMP1-201ENST00000361716 STKLD1Q8NE28 680 aa13.27□□□□□ -0.29
VAMP1-201ENST00000361716 SENP7Q9BQF6 1050 aa13.27□□□□□ -0.29
VAMP1-201ENST00000361716 SH3GLB1Q9Y371 365 aa13.27□□□□□ -0.29
VAMP1-201ENST00000361716 CCDC88AQ3V6T2 1871 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 FSCN2O14926 492 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 ZBTB7AO95365 584 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 PROCP04070 461 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 CYP11B1P15538 503 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 SERPINB8P50452 374 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 STAT2P52630 851 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 NAA20P61599 178 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 AP3B2Q13367 1082 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 HIF1AQ16665 826 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 SMTNL2Q2TAL5 461 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 CC2D2BQ6DHV5 1058 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 OGFOD1Q8N543 542 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 EPS8L1Q8TE68 723 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 CFAP36Q96G28 342 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 PPP1R36Q96LQ0 422 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 ACCSQ96QU6 501 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 NENFQ9UMX5 172 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 RPL26L1Q9UNX3 145 aaKnown RBP13.26□□□□□ -0.29
VAMP1-201ENST00000361716 DTNAQ9Y4J8 743 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 PCDHB4Q9Y5E5 795 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 ACTL7BQ9Y614 415 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 E5RJQ4 531 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 COPEO14579 308 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 TBC1D12O60347 775 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 KRT1P04264 644 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 MUTP22033 750 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 CHI3L2Q15782 390 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 CYP1B1Q16678 543 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 TMEM259Q4ZIN3 620 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 WDR44Q5JSH3 913 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 EFHC1Q5JVL4 640 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 AZIN2Q96A70 460 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 HAPLN3Q96S86 360 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 TLE6Q9H808 572 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.26□□□□□ -0.29
VAMP1-201ENST00000361716 SENP1Q9P0U3 644 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 ATF5Q9Y2D1 282 aaPredicted RBP13.26□□□□□ -0.29
VAMP1-201ENST00000361716 E2F8A0AVK6 867 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 TTLL13PA6NNM8 815 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 H3BSA7 217 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 MAGEB2O15479 319 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 PRPF4O43172 522 aaKnown RBP eCLIP13.26□□□□□ -0.29
VAMP1-201ENST00000361716 PABPC4LP0CB38 370 aaKnown RBP13.26□□□□□ -0.29
VAMP1-201ENST00000361716 GCAP28676 217 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 CIITAP33076 1130 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 ACOT2P49753 483 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 PDE1BQ01064 536 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 CEP55Q53EZ4 464 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 RC3H1Q5TC82 1133 aaKnown RBP13.26□□□□□ -0.29
VAMP1-201ENST00000361716 SCARA5Q6ZMJ2 495 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 PPM1NQ8N819 430 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 TRIM56Q9BRZ2 755 aaKnown RBP13.26□□□□□ -0.29
VAMP1-201ENST00000361716 C1orf112Q9NSG2 853 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 PI4KBQ9UBF8 816 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 ADAMTS6Q9UKP5 1117 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 INPP5FQ9Y2H2 1132 aa13.26□□□□□ -0.29
VAMP1-201ENST00000361716 DENND3A2RUS2 1198 aa13.25□□□□□ -0.29
VAMP1-201ENST00000361716 CYB561D2O14569 222 aa13.25□□□□□ -0.29
VAMP1-201ENST00000361716 VIL1P09327 827 aaKnown RBP13.25□□□□□ -0.29
VAMP1-201ENST00000361716 SMARCA1P28370 1054 aa13.25□□□□□ -0.29
VAMP1-201ENST00000361716 PHBP35232 272 aa13.25□□□□□ -0.29
VAMP1-201ENST00000361716 NCKAP1LP55160 1127 aa13.25□□□□□ -0.29
VAMP1-201ENST00000361716 GK3PQ14409 553 aa13.25□□□□□ -0.29
VAMP1-201ENST00000361716 PDK1Q15118 436 aa13.25□□□□□ -0.29
VAMP1-201ENST00000361716 SNRNP35Q16560 246 aaKnown RBP13.25□□□□□ -0.29
VAMP1-201ENST00000361716 CCDC92Q53HC0 331 aaPredicted RBP13.25□□□□□ -0.29
VAMP1-201ENST00000361716 C1orf186Q6ZWK4 172 aa13.25□□□□□ -0.29
VAMP1-201ENST00000361716 OTOP1Q7RTM1 612 aa13.25□□□□□ -0.29
VAMP1-201ENST00000361716 WDR11Q9BZH6 1224 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms