RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 MYO1EQ12965 1108 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 HLTFQ14527 1009 aaKnown RBP eCLIP13.33□□□□□ -0.28
GGPS1-202ENST00000358966 TAF5Q15542 800 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 KCNT1Q5JUK3 1230 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 CEP85LQ5SZL2 805 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 SH3PXD2AQ5TCZ1 1133 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 SEL1L2Q5TEA6 688 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 CCSAPQ6IQ19 270 aaPredicted RBP13.33□□□□□ -0.28
GGPS1-202ENST00000358966 BEST2Q8NFU1 509 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 AENQ8WTP8 325 aaKnown RBP13.33□□□□□ -0.28
GGPS1-202ENST00000358966 DDX27Q96GQ7 796 aaKnown RBP13.33□□□□□ -0.28
GGPS1-202ENST00000358966 VRTNQ9H8Y1 702 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 PCDHGC3Q9UN70 934 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 TRPV2Q9Y5S1 764 aa13.33□□□□□ -0.28
GGPS1-202ENST00000358966 PDCD11Q14690 1871 aaKnown RBP13.32□□□□□ -0.28
GGPS1-202ENST00000358966 ATP2C2O75185 946 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 FLT3P36888 993 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 TUBB4BP68371 445 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 PDCLQ13371 301 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 FBXO47Q5MNV8 452 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 KAZNQ674X7 775 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 TTC30AQ86WT1 665 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 GSTCDQ8NEC7 633 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 NT5C1AQ9BXI3 368 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 B3GNT5Q9BYG0 378 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 TRPV6Q9H1D0 765 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 R3HDM2Q9Y2K5 976 aaKnown RBP13.32□□□□□ -0.28
GGPS1-202ENST00000358966 TMEM191CA6NGB0 347 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 E5RJQ4 531 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 I3L4J1 428 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 PFKMP08237 780 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 KRT10P13645 584 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 ADORA2BP29275 332 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 GPD2P43304 727 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 CDC42EP1Q00587 391 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 INCA1Q0VD86 236 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 KYAT1Q16773 422 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 GOLGA7BQ2TAP0 167 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 SGO2Q562F6 1265 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 PRUNE1Q86TP1 453 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 SLC13A5Q86YT5 568 aaPredicted RBP13.32□□□□□ -0.28
GGPS1-202ENST00000358966 KLHDC9Q8NEP7 349 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 HASPINQ8TF76 798 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 KBTBD7Q8WVZ9 684 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 TRIM11Q96F44 468 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 PLEKHA5Q9HAU0 1116 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 GDF3Q9NR23 364 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 CHST7Q9NS84 486 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 FAM105AQ9NUU6 356 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 PADI3Q9ULW8 664 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 NOD1Q9Y239 953 aa13.32□□□□□ -0.28
GGPS1-202ENST00000358966 CASP8AP2Q9UKL3 1982 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 CASTOR2A6NHX0 329 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 F8W810 466 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 LSM8O95777 96 aaKnown RBP13.31□□□□□ -0.28
GGPS1-202ENST00000358966 RPSAP08865 295 aaKnown RBP13.31□□□□□ -0.28
GGPS1-202ENST00000358966 RALAP11233 206 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 P4HA1P13674 534 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 ECHS1P30084 290 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 SCNN1GP51170 649 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 YWHAEP62258 255 aaKnown RBP13.31□□□□□ -0.28
GGPS1-202ENST00000358966 POU5F1Q01860 360 aaKnown RBP13.31□□□□□ -0.28
GGPS1-202ENST00000358966 ITGA7Q13683 1181 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 SIX1Q15475 284 aaPredicted RBP13.31□□□□□ -0.28
GGPS1-202ENST00000358966 THEMIS2Q5TEJ8 643 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 TLDC1Q6P9B6 456 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 XYLT1Q86Y38 959 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 C3orf58Q8NDZ4 430 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 SH3TC2Q8TF17 1288 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 MAGOHBQ96A72 148 aaKnown RBP13.31□□□□□ -0.28
GGPS1-202ENST00000358966 MRPL47Q9HD33 250 aaKnown RBP13.31□□□□□ -0.28
GGPS1-202ENST00000358966 UBQLN1Q9UMX0 589 aaKnown RBP13.31□□□□□ -0.28
GGPS1-202ENST00000358966 A8MXQ7 604 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 KPNA7A9QM74 516 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 FSBPO95073 299 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 HMGCRP04035 888 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 PAEPP09466 180 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 CDH5P33151 784 aaPredicted RBP13.31□□□□□ -0.28
GGPS1-202ENST00000358966 MAGEA8P43361 318 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 HHATQ5VTY9 493 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 TRNP1Q6NT89 227 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 PMF1Q6P1K2 205 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 ARFGAP1Q8N6T3 406 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 BCAS4Q8TDM0 211 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 HAUS1Q96CS2 278 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 PCDHGA4Q9Y5G9 962 aa13.31□□□□□ -0.28
GGPS1-202ENST00000358966 PIRO00625 290 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 POMCP01189 267 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 INHAP05111 366 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 CALB1P05937 261 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 CTNNA2P26232 953 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 ACLYP53396 1101 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 USP4Q13107 963 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 TRIP13Q15645 432 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-202ENST00000358966 CDO1Q16878 200 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 PPP1R15BQ5SWA1 713 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 NME8Q8N427 588 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 CLEC4CQ8WTT0 213 aa13.3□□□□□ -0.28
GGPS1-202ENST00000358966 ZNF296Q8WUU4 475 aaPredicted RBP13.3□□□□□ -0.28
GGPS1-202ENST00000358966 ZWILCHQ9H900 591 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms