RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 FAM153CQ494X1 144 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 PRMT9Q6P2P2 845 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 TRIM62Q9BVG3 475 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 TRIM54Q9BYV2 358 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 KRT87PA6NCN2 255 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 RPL5P46777 297 aaKnown RBP9.1□□□□□ -0.95
COL6A6-201ENST00000358511 NR1H2P55055 460 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 USP10Q14694 798 aaKnown RBP9.1□□□□□ -0.95
COL6A6-201ENST00000358511 QKIQ96PU8 341 aaKnown RBP eCLIP9.1□□□□□ -0.95
COL6A6-201ENST00000358511 MKNK1Q9BUB5 465 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 SARS2Q9NP81 518 aaKnown RBP9.1□□□□□ -0.95
COL6A6-201ENST00000358511 PHGDHO43175 533 aaKnown RBP9.1□□□□□ -0.95
COL6A6-201ENST00000358511 TPST1O60507 370 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 PDE9AO76083 593 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 NR1D2Q14995 579 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 TRIQKQ629K1 86 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 ARHGAP17Q68EM7 881 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 OTULINQ96BN8 352 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 REXO4Q9GZR2 422 aaKnown RBP9.1□□□□□ -0.95
COL6A6-201ENST00000358511 PLGRKTQ9HBL7 147 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 THAP1Q9NVV9 213 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 TUBGCP4Q9UGJ1 667 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 ADAM30Q9UKF2 790 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 PCDHB2Q9Y5E7 798 aa9.1□□□□□ -0.95
COL6A6-201ENST00000358511 FKBP9O95302 570 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 KCNJ2P63252 427 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 MCL1Q07820 350 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 FAM83EQ2M2I3 478 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 KCNT1Q5JUK3 1230 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 SPDYAQ5MJ70 313 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 FKBP9P1Q75LS8 142 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 MREGQ8N565 214 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 TSPAN14Q8NG11 270 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 KRT6AP02538 564 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 NEDD8Q15843 81 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 SNRNP35Q16560 246 aaKnown RBP9.09□□□□□ -0.95
COL6A6-201ENST00000358511 CREG2Q8IUH2 290 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 FAM71DQ8N9W8 422 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 USP33Q8TEY7 942 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 RIC8BQ9NVN3 520 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 TARBP1Q13395 1621 aaKnown RBP9.09□□□□□ -0.95
COL6A6-201ENST00000358511 MYMKA6NI61 221 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 C3orf70A6NLC5 250 aaPredicted RBP9.09□□□□□ -0.95
COL6A6-201ENST00000358511 ERVV-1B6SEH8 477 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 STAT3P40763 770 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 QARSP47897 775 aaKnown RBP9.09□□□□□ -0.95
COL6A6-201ENST00000358511 CNGA2Q16280 664 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 MAPK6Q16659 721 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 ENKURQ8TC29 256 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 MAP3K14Q99558 947 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 REEP2Q9BRK0 252 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 CACNA2D2Q9NY47 1150 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 GTF3C4Q9UKN8 822 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.09□□□□□ -0.95
COL6A6-201ENST00000358511 SLCO1B7G3V0H7 640 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 KIAA0391O15091 583 aaKnown RBP9.09□□□□□ -0.95
COL6A6-201ENST00000358511 PSMD3O43242 534 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 PDPK2PQ6A1A2 396 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 PRG3Q9Y2Y8 225 aaPredicted RBP9.09□□□□□ -0.95
COL6A6-201ENST00000358511 PNPLA6Q8IY17 1366 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 C5orf58C9J3I9 102 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 CBX6O95503 412 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 TDP2O95551 362 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 TALDO1P37837 337 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 NFX1Q12986 1120 aaKnown RBP9.09□□□□□ -0.95
COL6A6-201ENST00000358511 ITGADQ13349 1161 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 PKN2Q16513 984 aaKnown RBP9.09□□□□□ -0.95
COL6A6-201ENST00000358511 TRIM71Q2Q1W2 868 aaKnown RBP9.09□□□□□ -0.95
COL6A6-201ENST00000358511 MFSD4BQ5TF39 518 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 RNF43Q68DV7 783 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 LARGE2Q8N3Y3 721 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 OR6B3Q8NGW1 331 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 CAPSLQ8WWF8 208 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 ELMO2Q96JJ3 720 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 CASS4Q9NQ75 786 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 AFF2P51816 1311 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 MEI4A8MW99 385 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 VWA5AO00534 786 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 FASP25445 335 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 MAPRE1Q15691 268 aaKnown RBP9.09□□□□□ -0.95
COL6A6-201ENST00000358511 ZNF568Q3ZCX4 644 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 FNIP1Q8TF40 1166 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 THAP2Q9H0W7 228 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 CIDEBQ9UHD4 219 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 RAD51BO15315 384 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 SERPINH1P50454 418 aaKnown RBP9.09□□□□□ -0.95
COL6A6-201ENST00000358511 TBX2Q13207 712 aaPredicted RBP9.09□□□□□ -0.95
COL6A6-201ENST00000358511 PDZK1Q5T2W1 519 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 BEST2Q8NFU1 509 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 RORBQ92753 470 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 PPP1R14BQ96C90 147 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 GCNAQ96QF7 691 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 C9orf16Q9BUW7 83 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 TCF7L2Q9NQB0 619 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 NAALADL1Q9UQQ1 740 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 DMTF1Q9Y222 760 aa9.09□□□□□ -0.95
COL6A6-201ENST00000358511 NPHP3-ACAD11A0A0J9YXS1 232 aa9.09□□□□□ -0.96
COL6A6-201ENST00000358511 TFE3P19532 575 aaPredicted RBP9.09□□□□□ -0.96
COL6A6-201ENST00000358511 SNRPFP62306 86 aaKnown RBP9.09□□□□□ -0.96
COL6A6-201ENST00000358511 SNX17Q15036 470 aa9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms