RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 TBC1D19Q8N5T2 526 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 ABHD8Q96I13 439 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 PAFAH2Q99487 392 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 ARHGAP20Q9P2F6 1191 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 ARIH2O95376 493 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 SERPINB5P36952 375 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 SERPINB8P50452 374 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 AQP5P55064 265 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 RDM1Q8NG50 284 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 SH3GL2Q99962 352 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 PRMT7Q9NVM4 692 aaPredicted RBP15.41■□□□□ 0.06
CHD4-201ENST00000357008 OVOS2A0A0G2JMS6 1433 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 OVOS2A0A0J9YW53 1432 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 OVOS2Q6IE36 1432 aa15.41■□□□□ 0.06
CHD4-201ENST00000357008 F8VZ95 297 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 AP5Z1O43299 807 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 TIMM44O43615 452 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 KRR1Q13601 381 aaKnown RBP15.4■□□□□ 0.06
CHD4-201ENST00000357008 XRRA1Q6P2D8 792 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 TTC30BQ8N4P2 665 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 TMEM120AQ9BXJ8 343 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 CDC42BPBQ9Y5S2 1711 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 CNTFP26441 200 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 WASHC2DQ5SRD0 308 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 IER5Q5VY09 327 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 ITM2BQ9Y287 266 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 POU4F1Q01851 419 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 MCL1Q07820 350 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 HHIPL2Q6UWX4 724 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 ACSF2Q96CM8 615 aaPredicted RBP15.4■□□□□ 0.06
CHD4-201ENST00000357008 SGF29Q96ES7 293 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 BBS2Q9BXC9 721 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 SEMA6BQ9H3T3 888 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 SNX13Q9Y5W8 968 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 SLC37A4O43826 429 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 LZTS3O60299 673 aaPredicted RBP15.4■□□□□ 0.06
CHD4-201ENST00000357008 RARBP10826 455 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 GRK2P25098 689 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 NFIXQ14938 502 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 SV2CQ496J9 727 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 STRIP1Q5VSL9 837 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 IZUMO2Q6UXV1 221 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 SLC26A11Q86WA9 606 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 SDR42E2A6NKP2 422 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 CCDC103Q8IW40 242 aa15.4■□□□□ 0.06
CHD4-201ENST00000357008 SLCO1B7G3V0H7 640 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 ZC3H11AO75152 810 aaKnown RBP eCLIP15.39■□□□□ 0.052e-9■□□□□ 8.9
CHD4-201ENST00000357008 RHOBTB1O94844 696 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 CYP11B1P15538 503 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 TFE3P19532 575 aaPredicted RBP15.39■□□□□ 0.05
CHD4-201ENST00000357008 AKT1P31749 480 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 TOB1P50616 345 aaPredicted RBP15.39■□□□□ 0.05
CHD4-201ENST00000357008 CCNG2Q16589 344 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 FAXCQ5TGI0 409 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 IL31Q6EBC2 164 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 PAPOLBQ9NRJ5 636 aaKnown RBP15.39■□□□□ 0.05
CHD4-201ENST00000357008 KCNH7Q9NS40 1196 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 FAM153AQ9UHL3 310 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 VPS9D1Q9Y2B5 631 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.39■□□□□ 0.05
CHD4-201ENST00000357008 PTENP60484 403 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 SNX31Q8N9S9 440 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 OTUD5Q96G74 571 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 HPDLQ96IR7 371 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 ZBED2Q9BTP6 218 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 RUSC1Q9BVN2 902 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 TARS2Q9BW92 718 aaKnown RBP15.39■□□□□ 0.05
CHD4-201ENST00000357008 DYRK4Q9NR20 520 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 GIMAP4Q9NUV9 329 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 TULP4Q9NRJ4 1543 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 RASSF9O75901 435 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 ZNF23P17027 643 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 SEL1L3Q68CR1 1132 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 PPP4R4Q6NUP7 873 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 APBB2Q92870 758 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 HES6Q96HZ4 224 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 DNAJC16Q9Y2G8 782 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 PCSK1P29120 753 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 PDK2Q15119 407 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 CDC42EP5Q6NZY7 148 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 IYDQ6PHW0 289 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 THUMPD3Q9BV44 507 aaKnown RBP15.39■□□□□ 0.05
CHD4-201ENST00000357008 SYBUQ9NX95 663 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 SELENONQ9NZV5 590 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 SKAP2O75563 359 aaPredicted RBP15.39■□□□□ 0.05
CHD4-201ENST00000357008 CYBBP04839 570 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 FBXO33Q7Z6M2 555 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 EXD1Q8NHP7 514 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 TUBGCP3Q96CW5 907 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 ALKQ9UM73 1620 aa15.39■□□□□ 0.05
CHD4-201ENST00000357008 MSH4O15457 936 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 SUPT7LO94864 414 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 DLGAP3O95886 979 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 RALBP11234 206 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 PEX5P50542 639 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 CHRNB3Q05901 458 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 CCDC142Q17RM4 750 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 ZNF571Q7Z3V5 609 aaPredicted RBP15.38■□□□□ 0.05
CHD4-201ENST00000357008 AGBL1Q96MI9 1066 aa15.38■□□□□ 0.05
CHD4-201ENST00000357008 IMPAD1Q9NX62 359 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms