RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 CNKSR3Q6P9H4 555 aa21.66■■□□□ 1.06
TRIM4-202ENST00000354241 FAM183BPQ6ZVS7 135 aa21.66■■□□□ 1.06
TRIM4-202ENST00000354241 FUKQ8N0W3 1084 aa21.66■■□□□ 1.06
TRIM4-202ENST00000354241 NOA1Q8NC60 698 aaKnown RBP21.66■■□□□ 1.06
TRIM4-202ENST00000354241 MCRS1Q96EZ8 462 aa21.66■■□□□ 1.06
TRIM4-202ENST00000354241 SLC4A5Q9BY07 1137 aa21.66■■□□□ 1.06
TRIM4-202ENST00000354241 FNDC1Q4ZHG4 1894 aaPredicted RBP21.65■■□□□ 1.06
TRIM4-202ENST00000354241 ZNF211Q13398 564 aaPredicted RBP21.65■■□□□ 1.06
TRIM4-202ENST00000354241 IKBKEQ14164 716 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 SPATA4Q8NEY3 305 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 JOSD2Q8TAC2 188 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 SPATA18Q8TC71 538 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 CARD9Q9H257 536 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 NRDE2Q9H7Z3 1164 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 RNF216Q9NWF9 866 aaPredicted RBP21.65■■□□□ 1.06
TRIM4-202ENST00000354241 PCDHA3Q9Y5H8 950 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 TBKBP1A7MCY6 615 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 TMEM189-UBE2V1I3L0A0 370 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 RFC2P35250 354 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 RFC1P35251 1148 aaPredicted RBP21.65■■□□□ 1.06
TRIM4-202ENST00000354241 SSR1P43307 286 aaKnown RBP21.65■■□□□ 1.06
TRIM4-202ENST00000354241 PEX5P50542 639 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 SNX16P57768 344 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 OGDHQ02218 1023 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 ZNF252P-AS1Q0IIN9 211 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.65■■□□□ 1.06
TRIM4-202ENST00000354241 CRIPAKQ8N1N5 446 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 ACTRT1Q8TDG2 376 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 STK32AQ8WU08 396 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 RTP3Q9BQQ7 232 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 LCMT1Q9UIC8 334 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 PCDHB8Q9UN66 801 aa21.65■■□□□ 1.06
TRIM4-202ENST00000354241 MYBPHLA2RUH7 354 aa21.64■■□□□ 1.05
TRIM4-202ENST00000354241 PGRMC1O00264 195 aaKnown RBP21.64■■□□□ 1.05
TRIM4-202ENST00000354241 UPP2O95045 317 aa21.64■■□□□ 1.05
TRIM4-202ENST00000354241 MAN1A1P33908 653 aa21.64■■□□□ 1.05
TRIM4-202ENST00000354241 OVOS1Q6IE37 1185 aa21.64■■□□□ 1.05
TRIM4-202ENST00000354241 PAQR9Q6ZVX9 377 aa21.64■■□□□ 1.05
TRIM4-202ENST00000354241 THEM5Q8N1Q8 247 aa21.64■■□□□ 1.05
TRIM4-202ENST00000354241 RASGEF1CQ8N431 466 aa21.64■■□□□ 1.05
TRIM4-202ENST00000354241 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.64■■□□□ 1.051e-6■■■■□ 20.6
TRIM4-202ENST00000354241 DUSP16Q9BY84 665 aa21.64■■□□□ 1.05
TRIM4-202ENST00000354241 B3GNT5Q9BYG0 378 aa21.64■■□□□ 1.05
TRIM4-202ENST00000354241 EPC1Q9H2F5 836 aa21.64■■□□□ 1.05
TRIM4-202ENST00000354241 TADA2AO75478 443 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 SLC8A3P57103 927 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 TUBB4BP68371 445 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 TMEM110Q86TL2 294 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 EMC1Q8N766 993 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 RNPC3Q96LT9 517 aaKnown RBP21.63■■□□□ 1.05
TRIM4-202ENST00000354241 ACBD6Q9BR61 282 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 MRPL9Q9BYD2 267 aaKnown RBP21.63■■□□□ 1.05
TRIM4-202ENST00000354241 HCSTQ9UBK5 93 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 TRIM43BA6NCK2 446 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 NRP1O14786 923 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 TIMP1P01033 207 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 TYMPP19971 482 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 PSMA2P25787 234 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 RWDD2BP57060 319 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 ITIH3Q06033 890 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 PIGHQ14442 188 aaPredicted RBP21.63■■□□□ 1.05
TRIM4-202ENST00000354241 MYCBPAPQ8TBZ2 947 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 TRIM43Q96BQ3 446 aaPredicted RBP21.63■■□□□ 1.05
TRIM4-202ENST00000354241 PCED1BQ96HM7 432 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 KRT82Q9NSB4 513 aa21.63■■□□□ 1.05
TRIM4-202ENST00000354241 F8VP50 259 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 XPO1O14980 1071 aaKnown RBP21.62■■□□□ 1.05
TRIM4-202ENST00000354241 GABBR2O75899 941 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 RHOXF2BP0C7M4 288 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 FAM200BP0CF97 657 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 LCP1P13796 627 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 NPR3P17342 541 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 ITGB8P26012 769 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 GJC1P36383 396 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 PLA2G4AP47712 749 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 BCAR1P56945 870 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 TAS2R40P59535 323 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 PLCB3Q01970 1234 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 INTS6LQ5JSJ4 861 aaKnown RBP21.62■■□□□ 1.05
TRIM4-202ENST00000354241 SEL1L2Q5TEA6 688 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 AADACL2Q6P093 401 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 FAM35AQ86V20 835 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 SCUBE3Q8IX30 993 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 VWCEQ96DN2 955 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 PIWIL1Q96J94 861 aaKnown RBP21.62■■□□□ 1.05
TRIM4-202ENST00000354241 RHOXF2Q9BQY4 288 aa21.62■■□□□ 1.05
TRIM4-202ENST00000354241 RBM12Q9NTZ6 932 aaKnown RBP21.62■■□□□ 1.05
TRIM4-202ENST00000354241 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.62■■□□□ 1.05
TRIM4-202ENST00000354241 TRAPPC3O43617 180 aa21.61■■□□□ 1.05
TRIM4-202ENST00000354241 ALDH2P05091 517 aa21.61■■□□□ 1.05
TRIM4-202ENST00000354241 RAG1P15918 1043 aa21.61■■□□□ 1.05
TRIM4-202ENST00000354241 ACADSBP45954 432 aa21.61■■□□□ 1.05
TRIM4-202ENST00000354241 YWHAHQ04917 246 aaPredicted RBP21.61■■□□□ 1.05
TRIM4-202ENST00000354241 CC2D1AQ6P1N0 951 aaPredicted RBP21.61■■□□□ 1.05
TRIM4-202ENST00000354241 RHOT1Q8IXI2 618 aa21.61■■□□□ 1.05
TRIM4-202ENST00000354241 PAPSS1O43252 624 aaPredicted RBP21.61■■□□□ 1.05
TRIM4-202ENST00000354241 GRAP2O75791 330 aa21.61■■□□□ 1.05
TRIM4-202ENST00000354241 BEST1O76090 585 aa21.61■■□□□ 1.05
TRIM4-202ENST00000354241 FGGP02679 453 aa21.61■■□□□ 1.05
TRIM4-202ENST00000354241 PYGMP11217 842 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms