RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 TRAF3IP3Q9Y228 551 aa14.2□□□□□ -0.14
CLCC1-202ENST00000348264 R4GN57 208 aa14.2□□□□□ -0.14
CLCC1-202ENST00000348264 C4BPAP04003 597 aaKnown RBP14.19□□□□□ -0.14
CLCC1-202ENST00000348264 CCNE1P24864 410 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 DDX6P26196 483 aaKnown RBP eCLIP14.19□□□□□ -0.14
CLCC1-202ENST00000348264 ATICP31939 592 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 GNL1P36915 607 aaPredicted RBP14.19□□□□□ -0.14
CLCC1-202ENST00000348264 AVPR1AP37288 418 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 RAP1GAPP47736 663 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 TNK2Q07912 1038 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 NCOA4Q13772 614 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 MAPRE1Q15691 268 aaKnown RBP14.19□□□□□ -0.14
CLCC1-202ENST00000348264 ARHGAP29Q52LW3 1261 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 WDR44Q5JSH3 913 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 C1orf220Q5T0J3 134 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 CEP135Q66GS9 1140 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 VSTM1Q6UX27 236 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 SCARA5Q6ZMJ2 495 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 MON1AQ86VX9 555 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 CELF5Q8N6W0 485 aaKnown RBP14.19□□□□□ -0.14
CLCC1-202ENST00000348264 TTC8Q8TAM2 541 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 MRPS31Q92665 395 aaKnown RBP14.19□□□□□ -0.14
CLCC1-202ENST00000348264 CCDC47Q96A33 483 aaKnown RBP14.19□□□□□ -0.14
CLCC1-202ENST00000348264 VRTNQ9H8Y1 702 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 TMEM30AQ9NV96 361 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 GTSE1Q9NYZ3 720 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 UXTQ9UBK9 157 aaPredicted RBP14.19□□□□□ -0.14
CLCC1-202ENST00000348264 ZMYM5Q9UJ78 669 aa14.19□□□□□ -0.14
CLCC1-202ENST00000348264 NCAM2O15394 837 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 LAMTOR5O43504 91 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 CALUO43852 315 aaPredicted RBP14.18□□□□□ -0.14
CLCC1-202ENST00000348264 CLSTN1O94985 981 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 PTPN1P18031 435 aaKnown RBP14.18□□□□□ -0.14
CLCC1-202ENST00000348264 NR2F2P24468 414 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 CTHP32929 405 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 KPNA1P52294 538 aaPredicted RBP14.18□□□□□ -0.14
CLCC1-202ENST00000348264 AP3M2P53677 418 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 CACNA2D1P54289 1103 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 CDH8P55286 799 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 USP46P62068 366 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 MTAPQ13126 283 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 KCNB1Q14721 858 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 ZACNQ401N2 412 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 TXNDC11Q6PKC3 985 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 SMYD4Q8IYR2 804 aaPredicted RBP14.18□□□□□ -0.14
CLCC1-202ENST00000348264 TMC2Q8TDI7 906 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 SLC22A12Q96S37 553 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 ZNF518BQ9C0D4 1074 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 SDCBP2Q9H190 292 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 CHRDQ9H2X0 955 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 TRPC7Q9HCX4 862 aa14.18□□□□□ -0.14
CLCC1-202ENST00000348264 DMXL1Q9Y485 3027 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 C2orf78A6NCI8 922 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 A8MXQ7 604 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 F8VP50 259 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 SPECC1L-ADORA2AF8WAN1 911 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 CLDN5O00501 218 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 AKAP3O75969 853 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 KIF20AO95235 890 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 FAM163BP0C2L3 166 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 GRIK1P39086 918 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 MLLT6P55198 1093 aaPredicted RBP14.17□□□□□ -0.14
CLCC1-202ENST00000348264 PLCB2Q00722 1185 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 PNOCQ13519 176 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 NFIL3Q16649 462 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 ZCWPW2Q504Y3 356 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 ZNF667Q5HYK9 610 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 SV2AQ7L0J3 742 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 FMR1NBQ8N0W7 255 aaPredicted RBP14.17□□□□□ -0.14
CLCC1-202ENST00000348264 GUF1Q8N442 669 aaKnown RBP14.17□□□□□ -0.14
CLCC1-202ENST00000348264 B3GALNT2Q8NCR0 500 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 MSANTD3Q96H12 275 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 SPATA17Q96L03 361 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 C8orf33Q9H7E9 229 aaPredicted RBP14.17□□□□□ -0.14
CLCC1-202ENST00000348264 KIF9Q9HAQ2 790 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 HPS4Q9NQG7 708 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 PRMT8Q9NR22 394 aaPredicted RBP14.17□□□□□ -0.14
CLCC1-202ENST00000348264 RBM12Q9NTZ6 932 aaKnown RBP14.17□□□□□ -0.14
CLCC1-202ENST00000348264 TDP1Q9NUW8 608 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 FBXO4Q9UKT5 387 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 FRMD4BQ9Y2L6 1034 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 CEP250Q9BV73 2442 aa14.17□□□□□ -0.14
CLCC1-202ENST00000348264 MYO16Q9Y6X6 1858 aa14.16□□□□□ -0.14
CLCC1-202ENST00000348264 SOBPA7XYQ1 873 aa14.16□□□□□ -0.14
CLCC1-202ENST00000348264 TRIM66O15016 1216 aa14.16□□□□□ -0.14
CLCC1-202ENST00000348264 MAPK13O15264 365 aa14.16□□□□□ -0.14
CLCC1-202ENST00000348264 TRIM49P0CI25 452 aa14.16□□□□□ -0.14
CLCC1-202ENST00000348264 TRIM49CP0CI26 452 aa14.16□□□□□ -0.14
CLCC1-202ENST00000348264 CHRNB1P11230 501 aa14.16□□□□□ -0.14
CLCC1-202ENST00000348264 ANXA13P27216 316 aa14.16□□□□□ -0.14
CLCC1-202ENST00000348264 NUCB2P80303 420 aa14.16□□□□□ -0.14
CLCC1-202ENST00000348264 CSTF1Q05048 431 aaKnown RBP14.16□□□□□ -0.14
CLCC1-202ENST00000348264 USP4Q13107 963 aa14.16□□□□□ -0.14
CLCC1-202ENST00000348264 ZNF268Q14587 947 aaPredicted RBP14.16□□□□□ -0.14
CLCC1-202ENST00000348264 ZNF528Q3MIS6 628 aa14.16□□□□□ -0.14
CLCC1-202ENST00000348264 TRIM68Q6AZZ1 485 aa14.16□□□□□ -0.14
CLCC1-202ENST00000348264 SPOPLQ6IQ16 392 aa14.16□□□□□ -0.14
CLCC1-202ENST00000348264 TSSK4Q6SA08 328 aa14.16□□□□□ -0.14
CLCC1-202ENST00000348264 DENND5BQ6ZUT9 1274 aa14.16□□□□□ -0.14
CLCC1-202ENST00000348264 RALGPS2Q86X27 583 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms