RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 XPO6Q96QU8 1125 aaKnown RBP19.36■□□□□ 0.69
UBE3C-201ENST00000348165 NWD1Q149M9 1564 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 CXCL11O14625 94 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 LAMB3Q13751 1172 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 NYAP1Q6ZVC0 841 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 HS6ST3Q8IZP7 471 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 SGF29Q96ES7 293 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 PNMA5Q96PV4 448 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 ZBTB39O15060 712 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 VIL1P09327 827 aaKnown RBP19.35■□□□□ 0.69
UBE3C-201ENST00000348165 GRIK5Q16478 980 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 OTOP1Q7RTM1 612 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 ZNF467Q7Z7K2 595 aaPredicted RBP19.35■□□□□ 0.69
UBE3C-201ENST00000348165 RAB42Q8N4Z0 105 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 CCDC90BQ9GZT6 254 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 EPN3Q9H201 632 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 RANBP17Q9H2T7 1088 aaKnown RBP19.35■□□□□ 0.69
UBE3C-201ENST00000348165 NDE1Q9NXR1 346 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 CD274Q9NZQ7 290 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 TIMM13Q9Y5L4 95 aaPredicted RBP19.35■□□□□ 0.69
UBE3C-201ENST00000348165 LRRIQ1Q96JM4 1722 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 CASTOR2A6NHX0 329 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 MYL2P10916 166 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 EEF1DP29692 281 aaKnown RBP19.35■□□□□ 0.69
UBE3C-201ENST00000348165 MAPK7Q13164 816 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 FIGNQ5HY92 759 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 STARD7Q9NQZ5 370 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 ARHGAP20Q9P2F6 1191 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 SLC11A2P49281 568 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 CTXN3Q4LDR2 81 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 CDKAL1Q5VV42 579 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 DNAJB3Q8WWF6 145 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 ASCC2Q9H1I8 757 aaPredicted RBP19.35■□□□□ 0.69
UBE3C-201ENST00000348165 AURKCQ9UQB9 309 aa19.35■□□□□ 0.69
UBE3C-201ENST00000348165 hCG_2014768A0A024R1R8 64 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.34■□□□□ 0.69
UBE3C-201ENST00000348165 SMAPO00193 183 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 PYGLP06737 847 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 GZMAP12544 262 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 CSE1LP55060 971 aaKnown RBP19.34■□□□□ 0.69
UBE3C-201ENST00000348165 ZNF177Q13360 481 aaPredicted RBP19.34■□□□□ 0.69
UBE3C-201ENST00000348165 IFNEQ86WN2 208 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 WDR49Q8IV35 697 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 ARRDC4Q8NCT1 418 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 RRAGCQ9HB90 399 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 SNTG2Q9NY99 539 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 SLC2A3P11169 496 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 HOXA10P31260 410 aaPredicted RBP19.34■□□□□ 0.69
UBE3C-201ENST00000348165 FNTAP49354 379 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 MAP3K7CLP57077 242 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 PTPN11Q06124 597 aaPredicted RBP19.34■□□□□ 0.69
UBE3C-201ENST00000348165 LVRNQ6Q4G3 990 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 SYCE1LA8MT33 242 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 SUPT3HB4E1H0 165 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 MEFVO15553 781 aaPredicted RBP19.34■□□□□ 0.69
UBE3C-201ENST00000348165 PSTPIP1O43586 416 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 SUPT3HO75486 399 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 CKMP06732 381 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 ENO3P13929 434 aaPredicted RBP19.34■□□□□ 0.69
UBE3C-201ENST00000348165 ST3GAL1Q11201 340 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 BLOC1S5Q8TDH9 187 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 PAIP2BQ9ULR5 123 aaKnown RBP19.34■□□□□ 0.69
UBE3C-201ENST00000348165 RPS6KL1Q9Y6S9 549 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 ITSN1Q15811 1721 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 EIF4E1BA6NMX2 242 aaKnown RBP19.34■□□□□ 0.69
UBE3C-201ENST00000348165 TRIM49D1C9J1S8 452 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 STX7O15400 261 aaKnown RBP19.34■□□□□ 0.69
UBE3C-201ENST00000348165 BCAT1P54687 386 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 HIC1Q14526 733 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 TRADDQ15628 312 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 DENND5BQ6ZUT9 1274 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 ZNF473Q8WTR7 871 aaKnown RBP19.34■□□□□ 0.69
UBE3C-201ENST00000348165 APOL5Q9BWW9 433 aa19.34■□□□□ 0.69
UBE3C-201ENST00000348165 GRIK4Q16099 956 aa19.33■□□□□ 0.69
UBE3C-201ENST00000348165 PPP4R4Q6NUP7 873 aa19.33■□□□□ 0.69
UBE3C-201ENST00000348165 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.33■□□□□ 0.692e-9■□□□□ 11.1
UBE3C-201ENST00000348165 VGLL2Q8N8G2 317 aa19.33■□□□□ 0.69
UBE3C-201ENST00000348165 TMEM176AQ96HP8 235 aa19.33■□□□□ 0.69
UBE3C-201ENST00000348165 CINPQ9BW66 212 aaPredicted RBP19.33■□□□□ 0.69
UBE3C-201ENST00000348165 ROPN1BQ9BZX4 212 aaPredicted RBP19.33■□□□□ 0.69
UBE3C-201ENST00000348165 KDM4CQ9H3R0 1056 aa19.33■□□□□ 0.69
UBE3C-201ENST00000348165 ROPN1Q9HAT0 212 aaPredicted RBP19.33■□□□□ 0.69
UBE3C-201ENST00000348165 AAASQ9NRG9 546 aa19.33■□□□□ 0.69
UBE3C-201ENST00000348165 ZNF711Q9Y462 761 aa19.33■□□□□ 0.69
UBE3C-201ENST00000348165 CFAP99D6REC4 459 aa19.33■□□□□ 0.69
UBE3C-201ENST00000348165 EML1O00423 815 aa19.33■□□□□ 0.69
UBE3C-201ENST00000348165 ENDOD1O94919 500 aa19.33■□□□□ 0.69
UBE3C-201ENST00000348165 NUP93Q8N1F7 819 aa19.33■□□□□ 0.69
UBE3C-201ENST00000348165 TMA16Q96EY4 203 aaKnown RBP19.33■□□□□ 0.69
UBE3C-201ENST00000348165 SLC7A5P2Q9GIP4 190 aa19.33■□□□□ 0.69
UBE3C-201ENST00000348165 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.33■□□□□ 0.69
UBE3C-201ENST00000348165 GRID1Q9ULK0 1009 aa19.33■□□□□ 0.69
UBE3C-201ENST00000348165 USP15Q9Y4E8 981 aaPredicted RBP19.33■□□□□ 0.69
UBE3C-201ENST00000348165 CFAP73A6NFT4 308 aa19.33■□□□□ 0.68
UBE3C-201ENST00000348165 SOX11P35716 441 aa19.33■□□□□ 0.68
UBE3C-201ENST00000348165 RGS4P49798 205 aa19.33■□□□□ 0.68
UBE3C-201ENST00000348165 SEC24CP53992 1094 aa19.33■□□□□ 0.68
UBE3C-201ENST00000348165 RBM43Q6ZSC3 357 aaKnown RBP19.33■□□□□ 0.68
UBE3C-201ENST00000348165 SLIT1O75093 1534 aa19.33■□□□□ 0.68
UBE3C-201ENST00000348165 AKAP5P24588 427 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms