RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 SLC10A4Q96EP9 437 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 L3MBTL3Q96JM7 780 aaPredicted RBP21.13■□□□□ 0.97
SPG7-202ENST00000341316 SPON1Q9HCB6 807 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 SAYSD1Q9NPB0 183 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 PCSK1NQ9UHG2 260 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 NAALADL1Q9UQQ1 740 aa21.13■□□□□ 0.97
SPG7-202ENST00000341316 RBM47A0AV96 593 aaKnown RBP21.12■□□□□ 0.97
SPG7-202ENST00000341316 ITGAVP06756 1048 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 PLCB3Q01970 1234 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 MKRN3Q13064 507 aaKnown RBP21.12■□□□□ 0.97
SPG7-202ENST00000341316 TMEM132DQ14C87 1099 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 FAM133BQ5BKY9 247 aaKnown RBP21.12■□□□□ 0.97
SPG7-202ENST00000341316 HEXIM2Q96MH2 286 aaKnown RBP21.12■□□□□ 0.97
SPG7-202ENST00000341316 VTA1Q9NP79 307 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 ABCF3Q9NUQ8 709 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.12■□□□□ 0.97
SPG7-202ENST00000341316 MCM8Q9UJA3 840 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 ZSWIM8A7E2V4 1837 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 H3BRB1 525 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 PIK3R2O00459 728 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 IFNB1P01574 187 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 KDELR1P24390 212 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 ATICP31939 592 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 GDF10P55107 478 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 OTUD4Q01804 1114 aaKnown RBP21.12■□□□□ 0.97
SPG7-202ENST00000341316 ZNF268Q14587 947 aaPredicted RBP21.12■□□□□ 0.97
SPG7-202ENST00000341316 CCDC142Q17RM4 750 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 RAB6CQ53S08 254 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 RNASEH2BQ5TBB1 312 aaKnown RBP21.12■□□□□ 0.97
SPG7-202ENST00000341316 ACTL9Q8TC94 416 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 CCHCR1Q8TD31 782 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 MAGEC3Q8TD91 643 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 UPF1Q92900 1129 aaKnown RBP eCLIP21.12■□□□□ 0.973e-6■■■■□ 23.1
SPG7-202ENST00000341316 FAXDC2Q96IV6 333 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 RAB6CQ9H0N0 254 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 CXorf56Q9H5V9 222 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 TUT1Q9H6E5 874 aaKnown RBP21.12■□□□□ 0.97
SPG7-202ENST00000341316 MLXIPLQ9NP71 852 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 EURLQ9NYK6 297 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 LGALS13Q9UHV8 139 aa21.12■□□□□ 0.97
SPG7-202ENST00000341316 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.12■□□□□ 0.97
SPG7-202ENST00000341316 SGK1O00141 431 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 PDHXO00330 501 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 CST8O60676 142 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 TAZQ16635 292 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 CCDC63Q8NA47 563 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 DYDC1Q8WWB3 177 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 EMID1Q96A84 441 aaPredicted RBP21.11■□□□□ 0.97
SPG7-202ENST00000341316 MCRS1Q96EZ8 462 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 CYP3A43Q9HB55 503 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 PNMA3Q9UL41 463 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 KRT7P08729 469 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 GCAP28676 217 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 GABRB2P47870 512 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 NDST1P52848 882 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 E2F5Q15329 346 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 SH3PXD2AQ5TCZ1 1133 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 SMYD5Q6GMV2 418 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 TRNP1Q6NT89 227 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 SYT17Q9BSW7 474 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 FOXP3Q9BZS1 431 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 WDR35Q9P2L0 1181 aa21.11■□□□□ 0.97
SPG7-202ENST00000341316 SNX3O60493 162 aa21.1■□□□□ 0.97
SPG7-202ENST00000341316 ATP6V1G2O95670 118 aa21.1■□□□□ 0.97
SPG7-202ENST00000341316 MIPP30301 263 aa21.1■□□□□ 0.97
SPG7-202ENST00000341316 GAD2Q05329 585 aa21.1■□□□□ 0.97
SPG7-202ENST00000341316 DPY19L2Q6NUT2 758 aa21.1■□□□□ 0.97
SPG7-202ENST00000341316 PIWIL1Q96J94 861 aaKnown RBP21.1■□□□□ 0.97
SPG7-202ENST00000341316 DPP3Q9NY33 737 aa21.1■□□□□ 0.97
SPG7-202ENST00000341316 PLXNA1Q9UIW2 1896 aa21.1■□□□□ 0.97
SPG7-202ENST00000341316 A0A1B0GUA9 196 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 VDRP11473 427 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 BRAFP15056 766 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 STAT4Q14765 748 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 HADHQ16836 314 aaKnown RBP21.09■□□□□ 0.97
SPG7-202ENST00000341316 ANKRD42Q8N9B4 389 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 MS4A4AQ96JQ5 239 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 PEBP4Q96S96 227 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 PCDH9Q9HC56 1237 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 KCNK9Q9NPC2 374 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 GGT7Q9UJ14 662 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 EFR3BQ9Y2G0 817 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 BTBD19C9JJ37 291 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 CDH16O75309 829 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 BANF1O75531 89 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 OAS1P00973 400 aaKnown RBP21.09■□□□□ 0.97
SPG7-202ENST00000341316 HMGCRP04035 888 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 ABHD2P08910 425 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 SMPD1P17405 629 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 ATP5DP30049 168 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 CCNA1P78396 465 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 ADCY1Q08828 1119 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 INCA1Q0VD86 236 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 MYO1EQ12965 1108 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 MORF4L2Q15014 288 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 GRIK4Q16099 956 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 BBS12Q6ZW61 710 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 C12orf29Q8N999 325 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 GIMAP7Q8NHV1 300 aa21.09■□□□□ 0.97
SPG7-202ENST00000341316 PPP1R13LQ8WUF5 828 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms