RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 ACLYP53396 1101 aa18.06■□□□□ 0.48
ATAD3A-201ENST00000339113 TAP1Q03518 808 aa18.06■□□□□ 0.48
ATAD3A-201ENST00000339113 HLTFQ14527 1009 aaKnown RBP eCLIP18.06■□□□□ 0.48
ATAD3A-201ENST00000339113 PPP2R5EQ16537 467 aa18.06■□□□□ 0.48
ATAD3A-201ENST00000339113 PKDCCQ504Y2 493 aa18.06■□□□□ 0.48
ATAD3A-201ENST00000339113 TTMPQ5BVD1 217 aa18.06■□□□□ 0.48
ATAD3A-201ENST00000339113 JAMLQ86YT9 394 aa18.06■□□□□ 0.48
ATAD3A-201ENST00000339113 CCDC50Q8IVM0 306 aa18.06■□□□□ 0.48
ATAD3A-201ENST00000339113 RAET1EQ8TD07 263 aa18.06■□□□□ 0.48
ATAD3A-201ENST00000339113 RNF25Q96BH1 459 aaPredicted RBP18.06■□□□□ 0.48
ATAD3A-201ENST00000339113 ACSF2Q96CM8 615 aaPredicted RBP18.06■□□□□ 0.48
ATAD3A-201ENST00000339113 PIWIL1Q96J94 861 aaKnown RBP18.06■□□□□ 0.48
ATAD3A-201ENST00000339113 PDCD11Q14690 1871 aaKnown RBP18.06■□□□□ 0.48
ATAD3A-201ENST00000339113 XPOTO43592 962 aaKnown RBP18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 COILP38432 576 aaPredicted RBP18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 TAF6P49848 677 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 HTRA3P83110 453 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 PIGHQ14442 188 aaPredicted RBP18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 PMF1Q6P1K2 205 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 TSPAN18Q96SJ8 248 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 PLVAPQ9BX97 442 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 CHST12Q9NRB3 414 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 CHST7Q9NS84 486 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 PCYOX1Q9UHG3 505 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 MTUS1Q9ULD2 1270 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 UTP11Q9Y3A2 253 aaKnown RBP18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 E5RJQ4 531 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 GABBR2O75899 941 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 GNL1P36915 607 aaPredicted RBP18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 APLP1P51693 650 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 GSCP56915 257 aaPredicted RBP18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 ADCY2Q08462 1091 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 CUL1Q13616 776 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 DUPD1Q68J44 220 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 AGMOQ6ZNB7 445 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 LIMS2Q7Z4I7 341 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 RNF180Q86T96 592 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 UNC93AQ86WB7 457 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 NIPA2Q8N8Q9 360 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 ATG4AQ8WYN0 398 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 ARL8AQ96BM9 186 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 ZNF560Q96MR9 790 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 ERP44Q9BS26 406 aa18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 R3HDM2Q9Y2K5 976 aaKnown RBP18.05■□□□□ 0.48
ATAD3A-201ENST00000339113 SRRM3A6NNA2 597 aaPredicted RBP18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 GPR182O15218 404 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 PSMA2P25787 234 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 LRPAP1P30533 357 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 FLT3P36888 993 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 VEGFBP49765 207 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 KLF1Q13351 362 aaPredicted RBP18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 SNX1Q13596 522 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 DHX34Q14147 1143 aaKnown RBP18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 LPIN1Q14693 890 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 TRIM71Q2Q1W2 868 aaKnown RBP18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 EXD1Q8NHP7 514 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 LRRC19Q9H756 370 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 WDR35Q9P2L0 1181 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 CCDC130P13994 396 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 IBSPP21815 317 aaPredicted RBP18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 PNPLA4P41247 253 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 CCDC142Q17RM4 750 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 KDM7AQ6ZMT4 941 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 OSTM1Q86WC4 334 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 C12orf50Q8NA57 414 aaPredicted RBP18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 APPL2Q8NEU8 664 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 FAM118BQ9BPY3 351 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 OSBPL8Q9BZF1 889 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 PTPN22Q9Y2R2 807 aa18.04■□□□□ 0.48
ATAD3A-201ENST00000339113 FAM187AA6NFU0 413 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 LRCH4O75427 683 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 KRT10P13645 584 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 CDR1P51861 262 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 SV2CQ496J9 727 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 FAM102AQ5T9C2 384 aaPredicted RBP18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 LHX8Q68G74 356 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 TRNP1Q6NT89 227 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 FAM183BPQ6ZVS7 135 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 YTHDF3Q7Z739 585 aaKnown RBP18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 CCDC105Q8IYK2 499 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 CRYBG2Q8N1P7 616 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 EIF1ADQ8N9N8 165 aaKnown RBP18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 SLC35F5Q8WV83 523 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 RAPGEF5Q92565 580 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 ZIM3Q96PE6 472 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 TSPYL2Q9H2G4 693 aaPredicted RBP18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 SNX24Q9Y343 169 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 ARL5CA6NH57 179 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 IL1R2P27930 398 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 PTK7Q13308 1070 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 STILQ15468 1287 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 TAF5Q15542 800 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 OR6B2Q6IFH4 312 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 MFSD7Q6UXD7 560 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 NOD1Q9Y239 953 aa18.03■□□□□ 0.48
ATAD3A-201ENST00000339113 HUS1O60921 280 aa18.02■□□□□ 0.48
ATAD3A-201ENST00000339113 GRAP2O75791 330 aa18.02■□□□□ 0.48
ATAD3A-201ENST00000339113 INHAP05111 366 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms