RNA–Protein interactions for RNA: ENST00000335535.3

LCE4A-201, Transcript of late cornified envelope 4A, humanhuman

APPRIS P1 BASIC

Gene LCE4A, Length 388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4A-201ENST00000335535 CGRRF1Q99675 332 aa12.91□□□□□ -0.34
LCE4A-201ENST00000335535 SCNM1Q9BWG6 230 aa12.91□□□□□ -0.34
LCE4A-201ENST00000335535 COLEC11Q9BWP8 271 aa12.91□□□□□ -0.34
LCE4A-201ENST00000335535 RNF39Q9H2S5 420 aa12.91□□□□□ -0.34
LCE4A-201ENST00000335535 RPF1Q9H9Y2 349 aaKnown RBP12.91□□□□□ -0.34
LCE4A-201ENST00000335535 TMEM8AQ9HCN3 771 aa12.91□□□□□ -0.34
LCE4A-201ENST00000335535 PDE11AQ9HCR9 933 aa12.91□□□□□ -0.34
LCE4A-201ENST00000335535 CNTN3Q9P232 1028 aa12.91□□□□□ -0.34
LCE4A-201ENST00000335535 DNMT3BQ9UBC3 853 aaKnown RBP12.91□□□□□ -0.34
LCE4A-201ENST00000335535 DERAQ9Y315 318 aa12.91□□□□□ -0.34
LCE4A-201ENST00000335535 C2CD2Q9Y426 696 aa12.91□□□□□ -0.34
LCE4A-201ENST00000335535 IPPQ9Y573 584 aa12.91□□□□□ -0.34
LCE4A-201ENST00000335535 ARL5CA6NH57 179 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 LACTBL1A8MY62 500 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 AXIN1O15169 862 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 STX10O60499 249 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 TOP3BO95985 862 aaKnown RBP12.9□□□□□ -0.34
LCE4A-201ENST00000335535 TRIM49P0CI25 452 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 TRIM49CP0CI26 452 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 CXCL8P10145 99 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 CCDC6Q16204 474 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 RNF43Q68DV7 783 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 SMYD5Q6GMV2 418 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 SV2AQ7L0J3 742 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 CACNA2D4Q7Z3S7 1137 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 USP37Q86T82 979 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 EFCAB13Q8IY85 973 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 GSTCDQ8NEC7 633 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 IRF7Q92985 503 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 KIF12Q96FN5 646 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 MSANTD3Q96H12 275 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 CLSTN3Q9BQT9 956 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 CCDC94Q9BW85 323 aaPredicted RBP12.9□□□□□ -0.34
LCE4A-201ENST00000335535 TTYH3Q9C0H2 523 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 NXF3Q9H4D5 531 aaKnown RBP12.9□□□□□ -0.34
LCE4A-201ENST00000335535 PLCB1Q9NQ66 1216 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 VPS45Q9NRW7 570 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 HCFC1R1Q9NWW0 138 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 SNTG2Q9NY99 539 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 ADAM28Q9UKQ2 775 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 NEUROG3Q9Y4Z2 214 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 PIAS3Q9Y6X2 628 aa12.9□□□□□ -0.34
LCE4A-201ENST00000335535 SPAG17Q6Q759 2223 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 CCDC163A0A0D9SF12 145 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 RECQL4O94761 1208 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 NOL4O94818 638 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 ZIC2O95409 532 aaPredicted RBP12.89□□□□□ -0.35
LCE4A-201ENST00000335535 TPM3P06753 285 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 CEACAM1P13688 526 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 CSRP1P21291 193 aaKnown RBP12.89□□□□□ -0.35
LCE4A-201ENST00000335535 MATR3P43243 847 aaKnown RBP eCLIP12.89□□□□□ -0.35
LCE4A-201ENST00000335535 UBXN1Q04323 297 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 LRRC32Q14392 662 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 ARID5BQ14865 1188 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 RTP2Q5QGT7 225 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 KRT39Q6A163 491 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 C1orf228Q6PIY5 440 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 OR5B17Q8NGF7 314 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 GAB3Q8WWW8 586 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 PIK3R5Q8WYR1 880 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 CCDC127Q96BQ5 260 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 ZMAT2Q96NC0 199 aaKnown RBP12.89□□□□□ -0.35
LCE4A-201ENST00000335535 EDEM3Q9BZQ6 932 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 CXCL16Q9H2A7 254 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 BRD9Q9H8M2 597 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 ZNF334Q9HCZ1 680 aaPredicted RBP12.89□□□□□ -0.35
LCE4A-201ENST00000335535 SIX2Q9NPC8 291 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 TOPORSQ9NS56 1045 aaPredicted RBP12.89□□□□□ -0.35
LCE4A-201ENST00000335535 FBXL5Q9UKA1 691 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 GIT1Q9Y2X7 761 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 GPSM3Q9Y4H4 160 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 HES2Q9Y543 173 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 ADAMTS20P59510 1910 aa12.89□□□□□ -0.35
LCE4A-201ENST00000335535 VNN1O95497 513 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 CAPNS1P04632 268 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 TPM2P07951 284 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 HARSP12081 509 aaKnown RBP12.88□□□□□ -0.35
LCE4A-201ENST00000335535 PON1P27169 355 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 MPLP40238 635 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 GCLMP48507 274 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 OSTNP61366 133 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 SYCP1Q15431 976 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 NAB2Q15742 525 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 TMEM132AQ24JP5 1023 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 SLC5A9Q2M3M2 681 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 FKBP15Q5T1M5 1219 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 TDRD10Q5VZ19 366 aaKnown RBP12.88□□□□□ -0.35
LCE4A-201ENST00000335535 SPECC1LQ69YQ0 1117 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 PRSS55Q6UWB4 352 aaPredicted RBP12.88□□□□□ -0.35
LCE4A-201ENST00000335535 EHBP1Q8NDI1 1231 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 SLC7A14Q8TBB6 771 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 ING5Q8WYH8 240 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 MCRS1Q96EZ8 462 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 ZC3H10Q96K80 434 aaKnown RBP12.88□□□□□ -0.35
LCE4A-201ENST00000335535 FNBP1Q96RU3 617 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 TRMT61BQ9BVS5 477 aaKnown RBP12.88□□□□□ -0.35
LCE4A-201ENST00000335535 MIOSQ9NXC5 875 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 POLIQ9UNA4 740 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 MSRB2Q9Y3D2 182 aa12.88□□□□□ -0.35
LCE4A-201ENST00000335535 MRPS23Q9Y3D9 190 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms