RNA–Protein interactions for RNA: ENST00000333467.3

APOBEC3B-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-201ENST00000333467 SCN1AP35498 2009 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 CCDC195A0A1B0GUA6 201 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 PODXLO00592 558 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 SHOX2O60902 331 aaPredicted RBP11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 HSF2BPO75031 334 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 PIGRP01833 764 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 FERP16591 822 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 FGFR3P22607 806 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 TKTP29401 623 aaKnown RBP11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 NMT1P30419 496 aaKnown RBP11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 TNFSF9P41273 254 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 BRCC3P46736 316 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 NAP1L1P55209 391 aaKnown RBP11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 ZXDAP98168 799 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 SLC20A2Q08357 652 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 RAPGEF1Q13905 1077 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 SLC10A6Q3KNW5 377 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 CD300LGQ6UXG3 332 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 HFE2Q6ZVN8 426 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 SFR1Q86XK3 245 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 DDX27Q96GQ7 796 aaKnown RBP11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 SPAG5Q96R06 1193 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 CLSTN3Q9BQT9 956 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 NLRC4Q9NPP4 1024 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 GDF3Q9NR23 364 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 TUBGCP4Q9UGJ1 667 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 FBXW11Q9UKB1 542 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 TFR2Q9UP52 801 aa11.8□□□□□ -0.52
APOBEC3B-201ENST00000333467 CLUHO75153 1309 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 GOLGA6CA6NDK9 693 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 ADAM12O43184 909 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 FAM189A1O60320 539 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 N4BP1O75113 896 aaKnown RBP11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 GOLGA6DP0CG33 693 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 UCHL3P15374 230 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 SCP2P22307 547 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 ALCAMQ13740 583 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 PPP2R5EQ16537 467 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 ZBTB41Q5SVQ8 909 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 SLC39A4Q6P5W5 647 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 LILRA6Q6PI73 481 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 DCLRE1AQ6PJP8 1040 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 TRIM67Q6ZTA4 783 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 MAP4K3Q8IVH8 894 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 NELFCDQ8IXH7 590 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 TMEM130Q8N3G9 435 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 KREMEN2Q8NCW0 462 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 HDAC7Q8WUI4 952 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 TMEM174Q8WUU8 243 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 SMG7Q92540 1137 aaKnown RBP11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 ZNF707Q96C28 371 aaPredicted RBP11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 LRRC1Q9BTT6 524 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 PLEKHA4Q9H4M7 779 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 ZDHHC7Q9NXF8 308 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 GOLGA6AQ9NYA3 693 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 MTRRQ9UBK8 725 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 USTQ9Y2C2 406 aa11.79□□□□□ -0.52
APOBEC3B-201ENST00000333467 TMEM221A6NGB7 291 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 CCDC188H7C350 402 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 M0R296 226 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 TRAPPC3O43617 180 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 PALMO75781 387 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 C1RP00736 705 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 NR3C1P04150 777 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 ASGR2P07307 311 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 PSMC2P35998 433 aaKnown RBP11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 GTF2BQ00403 316 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 SIGLEC14Q08ET2 396 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 MTMR3Q13615 1198 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 CUL1Q13616 776 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 RPS6KA1Q15418 735 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 ZC2HC1CQ53FD0 456 aaPredicted RBP11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 LIN9Q5TKA1 542 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 SND1Q7KZF4 910 aaKnown RBP eCLIP11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 IRF2BP2Q7Z5L9 587 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 CD302Q8IX05 232 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 ZDHHC14Q8IZN3 488 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 GLIS3Q8NEA6 775 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 ACTRT1Q8TDG2 376 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 MSTO1Q9BUK6 570 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 SMOC2Q9H3U7 446 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 SORCS3Q9UPU3 1222 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 NUB1Q9Y5A7 615 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 CDY1Q9Y6F8 540 aa11.78□□□□□ -0.52
APOBEC3B-201ENST00000333467 A0A087X0T9 212 aa11.77□□□□□ -0.52
APOBEC3B-201ENST00000333467 SRRM3A6NNA2 597 aaPredicted RBP11.77□□□□□ -0.52
APOBEC3B-201ENST00000333467 TISP43B9A030 160 aa11.77□□□□□ -0.52
APOBEC3B-201ENST00000333467 OGTO15294 1046 aa11.77□□□□□ -0.52
APOBEC3B-201ENST00000333467 ZMYND10O75800 440 aa11.77□□□□□ -0.52
APOBEC3B-201ENST00000333467 PAPLNO95428 1278 aa11.77□□□□□ -0.52
APOBEC3B-201ENST00000333467 C8AP07357 584 aa11.77□□□□□ -0.52
APOBEC3B-201ENST00000333467 CLTAP09496 248 aa11.77□□□□□ -0.52
APOBEC3B-201ENST00000333467 FAM228BP0C875 321 aa11.77□□□□□ -0.52
APOBEC3B-201ENST00000333467 PON1P27169 355 aa11.77□□□□□ -0.52
APOBEC3B-201ENST00000333467 ABCD1P33897 745 aa11.77□□□□□ -0.52
APOBEC3B-201ENST00000333467 GGCXP38435 758 aa11.77□□□□□ -0.52
APOBEC3B-201ENST00000333467 JAM2P57087 298 aa11.77□□□□□ -0.52
APOBEC3B-201ENST00000333467 ENOX2Q16206 610 aaKnown RBP11.77□□□□□ -0.52
APOBEC3B-201ENST00000333467 EMC10Q5UCC4 262 aa11.77□□□□□ -0.52
APOBEC3B-201ENST00000333467 RSPO2Q6UXX9 243 aaPredicted RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms