RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 SYCP2LQ5T4T6 812 aa16.01■□□□□ 0.15
CTHRC1-201ENST00000330295 C6orf118Q5T5N4 469 aa16.01■□□□□ 0.15
CTHRC1-201ENST00000330295 DHRS13Q6UX07 377 aa16.01■□□□□ 0.15
CTHRC1-201ENST00000330295 TMPRSS12Q86WS5 348 aa16.01■□□□□ 0.15
CTHRC1-201ENST00000330295 ZNF419Q96HQ0 510 aaPredicted RBP16.01■□□□□ 0.15
CTHRC1-201ENST00000330295 ACAP3Q96P50 834 aa16.01■□□□□ 0.15
CTHRC1-201ENST00000330295 NACC1Q96RE7 527 aa16.01■□□□□ 0.15
CTHRC1-201ENST00000330295 SLC26A6Q9BXS9 759 aa16.01■□□□□ 0.15
CTHRC1-201ENST00000330295 LINC00597Q9H2U6 94 aa16.01■□□□□ 0.15
CTHRC1-201ENST00000330295 GAREM1Q9H706 876 aa16.01■□□□□ 0.15
CTHRC1-201ENST00000330295 TUBGCP4Q9UGJ1 667 aa16.01■□□□□ 0.15
CTHRC1-201ENST00000330295 AK5Q9Y6K8 562 aa16.01■□□□□ 0.15
CTHRC1-201ENST00000330295 CABIN1Q9Y6J0 2220 aa16■□□□□ 0.15
CTHRC1-201ENST00000330295 TNFSF14O43557 240 aa16■□□□□ 0.15
CTHRC1-201ENST00000330295 CER1O95813 267 aa16■□□□□ 0.15
CTHRC1-201ENST00000330295 HMGA1P17096 107 aaKnown RBP16■□□□□ 0.15
CTHRC1-201ENST00000330295 ATP2B1P20020 1258 aa16■□□□□ 0.15
CTHRC1-201ENST00000330295 KIR2DL1P43626 348 aaPredicted RBP16■□□□□ 0.15
CTHRC1-201ENST00000330295 AARSP49588 968 aaKnown RBP eCLIP16■□□□□ 0.15
CTHRC1-201ENST00000330295 DMP1Q13316 513 aaPredicted RBP16■□□□□ 0.15
CTHRC1-201ENST00000330295 NTRK3Q16288 839 aa16■□□□□ 0.15
CTHRC1-201ENST00000330295 PTPRNQ16849 979 aa16■□□□□ 0.15
CTHRC1-201ENST00000330295 ZNF568Q3ZCX4 644 aa16■□□□□ 0.15
CTHRC1-201ENST00000330295 EMC10Q5UCC4 262 aa16■□□□□ 0.15
CTHRC1-201ENST00000330295 KIFC3Q9BVG8 833 aa16■□□□□ 0.15
CTHRC1-201ENST00000330295 NXF1Q9UBU9 619 aaKnown RBP16■□□□□ 0.15
CTHRC1-201ENST00000330295 IL17BQ9UHF5 180 aa16■□□□□ 0.15
CTHRC1-201ENST00000330295 PCDHGB2Q9Y5G2 931 aa16■□□□□ 0.15
CTHRC1-201ENST00000330295 UBR5O95071 2799 aaPredicted RBP16■□□□□ 0.15
CTHRC1-201ENST00000330295 ZNF217O75362 1048 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 CDKL5O76039 1030 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 IFNAR1P17181 557 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 TYMPP19971 482 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 MAOBP27338 520 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 MATKP42679 507 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 CDR1P51861 262 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 EFNA5P52803 228 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 CCT2P78371 535 aaKnown RBP15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 MESP2Q0VG99 397 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 MYO1EQ12965 1108 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 WDR45BQ5MNZ6 344 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 DSTYKQ6XUX3 929 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 SLFN12Q8IYM2 578 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 TMEM130Q8N3G9 435 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 OR10T2Q8NGX3 314 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 TMEM206Q9H813 350 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 UPF2Q9HAU5 1272 aaKnown RBP15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 CYP8B1Q9UNU6 501 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 BTBD3Q9Y2F9 522 aa15.99■□□□□ 0.15
CTHRC1-201ENST00000330295 A0A1B0GTW7 788 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 MYMKA6NI61 221 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 CCNT1O60563 726 aaKnown RBP15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 ANKRD17O75179 2603 aaKnown RBP15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 KAT7O95251 611 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 APODP05090 189 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 CKMP06732 381 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 USP17L7P0C7H9 530 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 XRCC6P12956 609 aaKnown RBP eCLIP15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 ANK1P16157 1881 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 SSRP1Q08945 709 aaKnown RBP15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 CCDC173Q0VFZ6 552 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 TOB2Q14106 344 aaPredicted RBP15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 PPP2R5AQ15172 486 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 NPY5RQ15761 445 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 SLC39A12Q504Y0 691 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 PKDCCQ504Y2 493 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 IL27RAQ6UWB1 636 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 NEK8Q86SG6 692 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 SPACA3Q8IXA5 215 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 FGF11Q92914 225 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 FOXJ1Q92949 421 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 SLC22A12Q96S37 553 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 CYP2S1Q96SQ9 504 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 PNKPQ96T60 521 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 TRPC7Q9HCX4 862 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 PTPRHQ9HD43 1115 aa15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.98■□□□□ 0.15
CTHRC1-201ENST00000330295 NOTCH2Q04721 2471 aa15.97■□□□□ 0.15
CTHRC1-201ENST00000330295 NDUFS2O75306 463 aa15.97■□□□□ 0.15
CTHRC1-201ENST00000330295 TADA3O75528 432 aa15.97■□□□□ 0.15
CTHRC1-201ENST00000330295 SLC6A11P48066 632 aa15.97■□□□□ 0.15
CTHRC1-201ENST00000330295 RTP5Q14D33 572 aa15.97■□□□□ 0.15
CTHRC1-201ENST00000330295 HLA-BQ31612 363 aa15.97■□□□□ 0.15
CTHRC1-201ENST00000330295 PRICKLE2Q7Z3G6 844 aa15.97■□□□□ 0.15
CTHRC1-201ENST00000330295 SPATA18Q8TC71 538 aa15.97■□□□□ 0.15
CTHRC1-201ENST00000330295 SH3RF2Q8TEC5 729 aa15.97■□□□□ 0.15
CTHRC1-201ENST00000330295 ACO2Q99798 780 aaKnown RBP15.97■□□□□ 0.15
CTHRC1-201ENST00000330295 MAGED2Q9UNF1 606 aaPredicted RBP15.97■□□□□ 0.15
CTHRC1-201ENST00000330295 KNL1Q8NG31 2342 aa15.97■□□□□ 0.15
CTHRC1-201ENST00000330295 STK36Q9NRP7 1315 aa15.96■□□□□ 0.15
CTHRC1-201ENST00000330295 A0A0A0MRY4 1105 aa15.96■□□□□ 0.15
CTHRC1-201ENST00000330295 TRAV19A0A0A6YYK7 116 aa15.96■□□□□ 0.15
CTHRC1-201ENST00000330295 BAG4O95429 457 aaKnown RBP15.96■□□□□ 0.15
CTHRC1-201ENST00000330295 CYP17A1P05093 508 aa15.96■□□□□ 0.15
CTHRC1-201ENST00000330295 HAPLN1P10915 354 aaPredicted RBP15.96■□□□□ 0.15
CTHRC1-201ENST00000330295 JUPP14923 745 aa15.96■□□□□ 0.15
CTHRC1-201ENST00000330295 LRPAP1P30533 357 aa15.96■□□□□ 0.15
CTHRC1-201ENST00000330295 HNF1BP35680 557 aa15.96■□□□□ 0.15
CTHRC1-201ENST00000330295 EIF2DP41214 584 aaKnown RBP15.96■□□□□ 0.15
CTHRC1-201ENST00000330295 NEK4P51957 841 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms