RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 RGS19P49795 217 aa19.84■□□□□ 0.77
EXOSC3-201ENST00000327304 SGO2Q562F6 1265 aa19.84■□□□□ 0.77
EXOSC3-201ENST00000327304 TRIM11Q96F44 468 aa19.84■□□□□ 0.77
EXOSC3-201ENST00000327304 TMEM169Q96HH4 297 aa19.84■□□□□ 0.77
EXOSC3-201ENST00000327304 ANKZF1Q9H8Y5 726 aa19.84■□□□□ 0.77
EXOSC3-201ENST00000327304 CRTAC1Q9NQ79 661 aa19.84■□□□□ 0.77
EXOSC3-201ENST00000327304 CTTNBP2NLQ9P2B4 639 aa19.84■□□□□ 0.77
EXOSC3-201ENST00000327304 UVRAGQ9P2Y5 699 aa19.84■□□□□ 0.77
EXOSC3-201ENST00000327304 AMFRQ9UKV5 643 aa19.84■□□□□ 0.77
EXOSC3-201ENST00000327304 PCDHB12Q9Y5F1 795 aa19.84■□□□□ 0.77
EXOSC3-201ENST00000327304 GBF1Q92538 1859 aa19.84■□□□□ 0.77
EXOSC3-201ENST00000327304 LINC01553A4QN01 128 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 O00370 1275 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 OAZ2O95190 189 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 PTPN1P18031 435 aaKnown RBP19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 PCSK1P29120 753 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 CDR1P51861 262 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 C11orf63Q6NUN7 778 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 SPRED2Q7Z698 418 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 PASD1Q8IV76 773 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 NOA1Q8NC60 698 aaKnown RBP19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 HES6Q96HZ4 224 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 TNIP3Q96KP6 325 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 TMEM209Q96SK2 561 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 PSMB7Q99436 277 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 PARD6BQ9BYG5 372 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 CDH9Q9ULB4 789 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 KIAA1257Q9ULG3 409 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 COG5Q9UP83 839 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 PDE4DIPQ5VU43 2346 aa19.83■□□□□ 0.77
EXOSC3-201ENST00000327304 CARNS1A5YM72 827 aa19.83■□□□□ 0.76
EXOSC3-201ENST00000327304 CAPN15O75808 1086 aa19.83■□□□□ 0.76
EXOSC3-201ENST00000327304 MYBL1P10243 752 aa19.83■□□□□ 0.76
EXOSC3-201ENST00000327304 CCDC130P13994 396 aa19.83■□□□□ 0.76
EXOSC3-201ENST00000327304 PPM1AP35813 382 aa19.83■□□□□ 0.76
EXOSC3-201ENST00000327304 CENPCQ03188 943 aa19.83■□□□□ 0.76
EXOSC3-201ENST00000327304 MRPL58Q14197 206 aaKnown RBP19.83■□□□□ 0.76
EXOSC3-201ENST00000327304 MDH1BQ5I0G3 518 aa19.83■□□□□ 0.76
EXOSC3-201ENST00000327304 PPP1R26Q5T8A7 1209 aaPredicted RBP19.83■□□□□ 0.76
EXOSC3-201ENST00000327304 THEM5Q8N1Q8 247 aa19.83■□□□□ 0.76
EXOSC3-201ENST00000327304 MMGT1Q8N4V1 131 aa19.83■□□□□ 0.76
EXOSC3-201ENST00000327304 ACBD6Q9BR61 282 aa19.83■□□□□ 0.76
EXOSC3-201ENST00000327304 TTPALQ9BTX7 342 aa19.83■□□□□ 0.76
EXOSC3-201ENST00000327304 PACSIN2Q9UNF0 486 aaPredicted RBP19.83■□□□□ 0.76
EXOSC3-201ENST00000327304 MYBPHLA2RUH7 354 aa19.82■□□□□ 0.76
EXOSC3-201ENST00000327304 USP41Q3LFD5 358 aa19.82■□□□□ 0.76
EXOSC3-201ENST00000327304 DENND1BQ6P3S1 775 aa19.82■□□□□ 0.76
EXOSC3-201ENST00000327304 SPATA4Q8NEY3 305 aa19.82■□□□□ 0.76
EXOSC3-201ENST00000327304 ZNF653Q96CK0 615 aa19.82■□□□□ 0.76
EXOSC3-201ENST00000327304 SELENOOQ9BVL4 669 aa19.82■□□□□ 0.76
EXOSC3-201ENST00000327304 EPC1Q9H2F5 836 aa19.82■□□□□ 0.76
EXOSC3-201ENST00000327304 PDCL3Q9H2J4 239 aa19.82■□□□□ 0.76
EXOSC3-201ENST00000327304 AVENQ9NQS1 362 aaPredicted RBP19.82■□□□□ 0.76
EXOSC3-201ENST00000327304 RAB21Q9UL25 225 aa19.82■□□□□ 0.76
EXOSC3-201ENST00000327304 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.82■□□□□ 0.76
EXOSC3-201ENST00000327304 MED7O43513 233 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 FGF18O76093 207 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 MICAL2O94851 1124 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 SOD2P04179 222 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 CA3P07451 260 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 CTNNB1P35222 781 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 CNGA2Q16280 664 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 GOLGA7BQ2TAP0 167 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 INTS6LQ5JSJ4 861 aaKnown RBP19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 ARHGAP17Q68EM7 881 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 PRSS55Q6UWB4 352 aaPredicted RBP19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 DDX53Q86TM3 631 aaKnown RBP19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 KLHL23Q8NBE8 558 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 CYFIP2Q96F07 1278 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 PKMYT1Q99640 499 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 C17orf80Q9BSJ5 609 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 HERC2P3Q9BVR0 1158 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 DNAI2Q9GZS0 605 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 GOLPH3Q9H4A6 298 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 CHST7Q9NS84 486 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 TSPAN16Q9UKR8 245 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 PCDHGC3Q9UN70 934 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 YBX2Q9Y2T7 364 aaKnown RBP19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 NLRC5Q86WI3 1866 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 KCNK3O14649 394 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 BMPR1AP36894 532 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 PBX2P40425 430 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 NSFP46459 744 aaKnown RBP19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 BRD3Q15059 726 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 CTXN3Q4LDR2 81 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 ZNF280DQ6N043 979 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 LCLAT1Q6UWP7 414 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 LRRTM3Q86VH5 581 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 MCOLN2Q8IZK6 566 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 SLC2A14Q8TDB8 520 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 VCPIP1Q96JH7 1222 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 TMLHEQ9NVH6 421 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 PCDHA11Q9Y5I1 949 aa19.81■□□□□ 0.76
EXOSC3-201ENST00000327304 TARSL2A2RTX5 802 aaKnown RBP19.8■□□□□ 0.76
EXOSC3-201ENST00000327304 M0QYV0 167 aa19.8■□□□□ 0.76
EXOSC3-201ENST00000327304 OR4Q2P0C623 313 aa19.8■□□□□ 0.76
EXOSC3-201ENST00000327304 ADORA2BP29275 332 aa19.8■□□□□ 0.76
EXOSC3-201ENST00000327304 CLCN6P51797 869 aa19.8■□□□□ 0.76
EXOSC3-201ENST00000327304 NOMO3P69849 1222 aa19.8■□□□□ 0.76
EXOSC3-201ENST00000327304 TSPY1Q01534 308 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms