RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 LINC01465Q8N7H1 131 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 ANKRD42Q8N9B4 389 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 MGARPQ8TDB4 240 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 XYLT2Q9H1B5 865 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 KLHL14Q9P2G3 628 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 SLC12A4Q9UP95 1085 aa15.67■□□□□ 0.1
CHFR-202ENST00000315585 IGF2BP3O00425 579 aaKnown RBP eCLIP15.66■□□□□ 0.1
CHFR-202ENST00000315585 ZNF286BP0CG31 522 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 ATP2A2P16615 1042 aaKnown RBP15.66■□□□□ 0.1
CHFR-202ENST00000315585 SNCBQ16143 134 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 CYP4F22Q6NT55 531 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 MTHFD1LQ6UB35 978 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 SAPCD2Q86UD0 394 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 IFNL1Q8IU54 200 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 SLC35B2Q8TB61 432 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 MAGEC3Q8TD91 643 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 SOCS4Q8WXH5 440 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 TGS1Q96RS0 853 aaKnown RBP15.66■□□□□ 0.1
CHFR-202ENST00000315585 SMC6Q96SB8 1091 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 BCO2Q9BYV7 579 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 ASB7Q9H672 318 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 HAUS2Q9NVX0 235 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 A0A1B0GUA9 196 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 PRPF4O43172 522 aaKnown RBP eCLIP15.66■□□□□ 0.1
CHFR-202ENST00000315585 TSHRP16473 764 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 DESP17661 470 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 GBP2P32456 591 aaPredicted RBP15.66■□□□□ 0.1
CHFR-202ENST00000315585 RGS2P41220 211 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 ARL4CP56559 192 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 PSMC1P62191 440 aaKnown RBP15.66■□□□□ 0.1
CHFR-202ENST00000315585 ZNF252P-AS1Q0IIN9 211 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 ATP13A4Q4VNC1 1196 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 CYB5D1Q6P9G0 228 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 SPATA21Q7Z572 469 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 PARP9Q8IXQ6 854 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 PPIL6Q8IXY8 311 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 WDTC1Q8N5D0 677 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 RSAD2Q8WXG1 361 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 NXF1Q9UBU9 619 aaKnown RBP15.66■□□□□ 0.1
CHFR-202ENST00000315585 TBK1Q9UHD2 729 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 KIAA1257Q9ULG3 409 aa15.66■□□□□ 0.1
CHFR-202ENST00000315585 OAS1P00973 400 aaKnown RBP15.65■□□□□ 0.1
CHFR-202ENST00000315585 KRT19P08727 400 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 SLC10A3P09131 477 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 LRRC14Q15048 493 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 GRIK4Q16099 956 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 RNASEH2BQ5TBB1 312 aaKnown RBP15.65■□□□□ 0.1
CHFR-202ENST00000315585 OLFML2BQ68BL8 750 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 C17orf99Q6UX52 265 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 BBS12Q6ZW61 710 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 ZNF410Q86VK4 478 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 VRTNQ9H8Y1 702 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 ASNSD1Q9NWL6 643 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 EURLQ9NYK6 297 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 GJB6O95452 261 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 HMGCRP04035 888 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 MCF2P10911 925 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 PECAM1P16284 738 aaPredicted RBP15.65■□□□□ 0.1
CHFR-202ENST00000315585 SLC8A1P32418 973 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 MYO1EQ12965 1108 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 SPARCL1Q14515 664 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 HIF1AQ16665 826 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 WDR72Q3MJ13 1102 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 CCDC63Q8NA47 563 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 TFAP2BQ92481 460 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 MAML1Q92585 1016 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 NCAPGQ9BPX3 1015 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 FAM118BQ9BPY3 351 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 TACO1Q9BSH4 297 aaKnown RBP15.65■□□□□ 0.1
CHFR-202ENST00000315585 VPS37BQ9H9H4 285 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 SSU72Q9NP77 194 aaKnown RBP15.65■□□□□ 0.1
CHFR-202ENST00000315585 FGFR1OP2Q9NVK5 253 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 KLHL11Q9NVR0 708 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 CTNNAL1Q9UBT7 734 aa15.65■□□□□ 0.1
CHFR-202ENST00000315585 TTLL13PA6NNM8 815 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 IFNB1P01574 187 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 KRT15P19012 456 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 STIP1P31948 543 aaKnown RBP15.64■□□□□ 0.09
CHFR-202ENST00000315585 RFC1P35251 1148 aaPredicted RBP15.64■□□□□ 0.09
CHFR-202ENST00000315585 SNX16P57768 344 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 TMED2Q15363 201 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 ZC3H12AQ5D1E8 599 aaKnown RBP15.64■□□□□ 0.09
CHFR-202ENST00000315585 APBB1IPQ7Z5R6 666 aaPredicted RBP15.64■□□□□ 0.09
CHFR-202ENST00000315585 TRABD2AQ86V40 505 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 NT5DC4Q86YG4 428 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 ATP11CQ8NB49 1132 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 RSAD1Q9HA92 442 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 IFT122Q9HBG6 1241 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 Q9Y3F1 56 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 A6NJR5 290 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 ATP2C2O75185 946 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 KDELR1P24390 212 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 PCK1P35558 622 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 OGDHQ02218 1023 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 STILQ15468 1287 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 KLHL38Q2WGJ6 581 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 SCARA5Q6ZMJ2 495 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 ZBED8Q8IZ13 594 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 KCTD6Q8NC69 237 aa15.64■□□□□ 0.09
CHFR-202ENST00000315585 MAK16Q9BXY0 300 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms